RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 CCDC96Q2M329 555 aa10.63□□□□□ -0.71
LMO3-222ENST00000540445 AKNAD1Q5T1N1 836 aa10.63□□□□□ -0.71
LMO3-222ENST00000540445 CCDC174Q6PII3 467 aa10.63□□□□□ -0.71
LMO3-222ENST00000540445 CHST13Q8NET6 341 aa10.63□□□□□ -0.71
LMO3-222ENST00000540445 RNF41Q9H4P4 317 aaPredicted RBP10.63□□□□□ -0.71
LMO3-222ENST00000540445 FBXO40Q9UH90 709 aa10.63□□□□□ -0.71
LMO3-222ENST00000540445 NRBP1Q9UHY1 535 aa10.63□□□□□ -0.71
LMO3-222ENST00000540445 DNAJC25-GNG10A0A024R161 153 aa10.62□□□□□ -0.71
LMO3-222ENST00000540445 RARBP10826 455 aa10.62□□□□□ -0.71
LMO3-222ENST00000540445 TOP1P11387 765 aaKnown RBP10.62□□□□□ -0.71
LMO3-222ENST00000540445 ALAS1P13196 640 aa10.62□□□□□ -0.71
LMO3-222ENST00000540445 SNAP25P60880 206 aa10.62□□□□□ -0.71
LMO3-222ENST00000540445 SNX17Q15036 470 aa10.62□□□□□ -0.71
LMO3-222ENST00000540445 AGBL1Q96MI9 1066 aa10.62□□□□□ -0.71
LMO3-222ENST00000540445 TRERF1Q96PN7 1200 aa10.62□□□□□ -0.71
LMO3-222ENST00000540445 TMEM47Q9BQJ4 181 aa10.62□□□□□ -0.71
LMO3-222ENST00000540445 GPCPD1Q9NPB8 672 aa10.62□□□□□ -0.71
LMO3-222ENST00000540445 ZMYM6O95789 1325 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 PLA2G6O60733 806 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 ZNF865P0CJ78 1059 aaPredicted RBP10.61□□□□□ -0.71
LMO3-222ENST00000540445 PCP11498 1178 aaKnown RBP10.61□□□□□ -0.71
LMO3-222ENST00000540445 TAL1P17542 331 aaPredicted RBP10.61□□□□□ -0.71
LMO3-222ENST00000540445 SLC16A2P36021 539 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 ADCYAP1R1P41586 468 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 NOVP48745 357 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 LRRC41Q15345 812 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 SLC39A5Q6ZMH5 540 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 RNF180Q86T96 592 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 MSL3Q8N5Y2 521 aaKnown RBP10.61□□□□□ -0.71
LMO3-222ENST00000540445 DCAF4Q8WV16 495 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 ESR2Q92731 530 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 FERMT2Q96AC1 680 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 LRCH3Q96II8 777 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 TTC14Q96N46 770 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 ZKSCAN3Q9BRR0 538 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 ACAD9Q9H845 621 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 XPNPEP3Q9NQH7 507 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 TCP11L1Q9NUJ3 509 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 RNF216Q9NWF9 866 aaPredicted RBP10.61□□□□□ -0.71
LMO3-222ENST00000540445 PRKAG2Q9UGJ0 569 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 CTNNA3Q9UI47 895 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 ZHX1Q9UKY1 873 aaPredicted RBP10.61□□□□□ -0.71
LMO3-222ENST00000540445 FAM184BQ9ULE4 1060 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 PRR12Q9ULL5 1215 aa10.61□□□□□ -0.71
LMO3-222ENST00000540445 FRMPD2Q68DX3 1309 aaPredicted RBP10.6□□□□□ -0.71
LMO3-222ENST00000540445 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 SNAI1O95863 264 aaPredicted RBP10.6□□□□□ -0.71
LMO3-222ENST00000540445 PGK1P00558 417 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 AKR1A1P14550 325 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 RTP1P59025 263 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 IMMTQ16891 758 aaKnown RBP10.6□□□□□ -0.71
LMO3-222ENST00000540445 TKFCQ3LXA3 575 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 LRIT3Q3SXY7 679 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 TTBK2Q6IQ55 1244 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 MAMDC4Q6UXC1 1216 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 RASGRP2Q7LDG7 609 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 IQCA1Q86XH1 822 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 TDHQ8IZJ6 230 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 FGD4Q96M96 766 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 RNF146Q9NTX7 359 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 CCPG1Q9ULG6 757 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 ATP11BQ9Y2G3 1177 aa10.6□□□□□ -0.71
LMO3-222ENST00000540445 ZNF536O15090 1300 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 SYNGAP1Q96PV0 1343 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 KDM4AO75164 1064 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 PDE4AP27815 886 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 MDM2Q00987 491 aaPredicted RBP10.59□□□□□ -0.71
LMO3-222ENST00000540445 CNTN2Q02246 1040 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 ACVR2BQ13705 512 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 CCDC178Q5BJE1 867 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 TTC22Q5TAA0 569 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 SYDE2Q5VT97 1194 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 C1orf53Q5VUE5 145 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 GPR153Q6NV75 609 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 NSMFQ6X4W1 530 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 NOL8Q76FK4 1167 aaKnown RBP10.59□□□□□ -0.71
LMO3-222ENST00000540445 ZNF467Q7Z7K2 595 aaPredicted RBP10.59□□□□□ -0.71
LMO3-222ENST00000540445 TBC1D10CQ8IV04 446 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 CCDC144CPQ8IYA2 1237 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 RUFY2Q8WXA3 655 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 LBHD1Q9BQE6 289 aaPredicted RBP10.59□□□□□ -0.71
LMO3-222ENST00000540445 DSCC1Q9BVC3 393 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 UBE2OQ9C0C9 1292 aaKnown RBP10.59□□□□□ -0.71
LMO3-222ENST00000540445 ABHD16BQ9H3Z7 469 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.59□□□□□ -0.71
LMO3-222ENST00000540445 PHF24Q9UPV7 400 aa10.59□□□□□ -0.71
LMO3-222ENST00000540445 B4E1Z4 1266 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 ADAMTS4O75173 837 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 ICAM1P05362 532 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 PDHBP11177 359 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 MUM1L1Q5H9M0 696 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 ARMCX2Q7L311 632 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 DGKHQ86XP1 1220 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 VTI1AQ96AJ9 217 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 LENG1Q96BZ8 264 aaPredicted RBP10.58□□□□□ -0.72
LMO3-222ENST00000540445 KRT23Q9C075 422 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 SPC25Q9HBM1 224 aa10.58□□□□□ -0.72
LMO3-222ENST00000540445 A1CFQ9NQ94 594 aaKnown RBP10.58□□□□□ -0.72
LMO3-222ENST00000540445 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
LMO3-222ENST00000540445 ZSWIM5Q9P217 1185 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms