RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 USP17L13C9JLJ4 530 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 USP17L11C9JVI0 530 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 USP17L18D6R9N7 530 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 USP17L22D6RA61 530 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 USP17L17D6RBQ6 530 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 USP17L19D6RCP7 530 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 USP17L20D6RJB6 530 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 RANBP6O60518 1105 aaKnown RBP13.49□□□□□ -0.25
TMEM258-205ENST00000540434 CYP21A2P08686 494 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 TSPY3P0CV98 308 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 TSPY8P0CW00 308 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 PTPREP23469 700 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 NOVP48745 357 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 USP14P54578 494 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 MFAP1P55081 439 aaKnown RBP13.49□□□□□ -0.25
TMEM258-205ENST00000540434 USP17L24Q0WX57 530 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 RCSD1Q6JBY9 416 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 STOX1Q6ZVD7 989 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 CCAR1Q8IX12 1150 aaKnown RBP13.49□□□□□ -0.25
TMEM258-205ENST00000540434 LRRC47Q8N1G4 583 aaKnown RBP13.49□□□□□ -0.25
TMEM258-205ENST00000540434 MICALL1Q8N3F8 863 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 GTF3C2Q8WUA4 911 aaPredicted RBP13.49□□□□□ -0.25
TMEM258-205ENST00000540434 ZKSCAN3Q9BRR0 538 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 BTBD7Q9P203 1132 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 RAD50Q92878 1312 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 SLC15A5A6NIM6 579 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 SPDYE16A6NNV3 312 aaPredicted RBP13.48□□□□□ -0.25
TMEM258-205ENST00000540434 F5H6K3 240 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 ZNF213O14771 459 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 NDUFB10O96000 172 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 CYBAP13498 195 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 MRE11P49959 708 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 KLRC3Q07444 240 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 MAP4K1Q92918 833 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.48□□□□□ -0.25
TMEM258-205ENST00000540434 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
TMEM258-205ENST00000540434 RABGAP1Q9Y3P9 1069 aa13.48□□□□□ -0.25
TMEM258-205ENST00000540434 TSPY2A6NKD2 308 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 B4E1Z4 1266 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 KBTBD13C9JR72 458 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 SLC3A2P08195 630 aaKnown RBP13.47□□□□□ -0.25
TMEM258-205ENST00000540434 RAG1P15918 1043 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 FPGSQ05932 587 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 GRB14Q14449 540 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 FAM83BQ5T0W9 1011 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 WDR78Q5VTH9 848 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 C1orf53Q5VUE5 145 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 MFSD6Q6ZSS7 791 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 CYB5R4Q7L1T6 521 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 ARRDC4Q8NCT1 418 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
TMEM258-205ENST00000540434 CXXC1Q9P0U4 656 aaPredicted RBP13.47□□□□□ -0.25
TMEM258-205ENST00000540434 COL11A1P12107 1806 aaPredicted RBP13.46□□□□□ -0.25
TMEM258-205ENST00000540434 RAD21O60216 631 aa13.46□□□□□ -0.25
TMEM258-205ENST00000540434 TTLL1O95922 423 aa13.46□□□□□ -0.25
TMEM258-205ENST00000540434 CLTBP09497 229 aa13.46□□□□□ -0.25
TMEM258-205ENST00000540434 PRAMEF19Q5SWL8 479 aa13.46□□□□□ -0.25
TMEM258-205ENST00000540434 SAMD1Q6SPF0 538 aaPredicted RBP13.46□□□□□ -0.25
TMEM258-205ENST00000540434 RUFY2Q8WXA3 655 aa13.46□□□□□ -0.25
TMEM258-205ENST00000540434 ATG4CQ96DT6 458 aa13.46□□□□□ -0.25
TMEM258-205ENST00000540434 TANGO6Q9C0B7 1094 aa13.46□□□□□ -0.25
TMEM258-205ENST00000540434 ZSWIM5Q9P217 1185 aa13.46□□□□□ -0.25
TMEM258-205ENST00000540434 RBM8AQ9Y5S9 174 aaKnown RBP13.46□□□□□ -0.25
TMEM258-205ENST00000540434 ZNF236Q9UL36 1845 aa13.46□□□□□ -0.26
TMEM258-205ENST00000540434 WDR46O15213 610 aaKnown RBP13.45□□□□□ -0.26
TMEM258-205ENST00000540434 PQBP1O60828 265 aaKnown RBP13.45□□□□□ -0.26
TMEM258-205ENST00000540434 KDM4AO75164 1064 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 DSG3P32926 999 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 COG2Q14746 738 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 LRRC41Q15345 812 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 C16orf59Q7L2K0 433 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 TMEM47Q9BQJ4 181 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 NKX2-4Q9H2Z4 354 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 ZNF287Q9HBT7 754 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 SENP2Q9HC62 589 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 TCP11L1Q9NUJ3 509 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 ADAMTS5Q9UNA0 930 aa13.45□□□□□ -0.26
TMEM258-205ENST00000540434 A0A0G2JMZ2 1700 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 KIAA0355O15063 1070 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 MCCP23508 829 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 CCNA1P78396 465 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 TMEM132BQ14DG7 1078 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 IMMTQ16891 758 aaKnown RBP13.44□□□□□ -0.26
TMEM258-205ENST00000540434 SLFN13Q68D06 897 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 LBX2Q6XYB7 198 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 CHST3Q7LGC8 479 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 REPS2Q8NFH8 660 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 CTNNA3Q9UI47 895 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 STX8Q9UNK0 236 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
TMEM258-205ENST00000540434 E7EWF7 191 aa13.43□□□□□ -0.26
TMEM258-205ENST00000540434 SEPT4O43236 478 aa13.43□□□□□ -0.26
TMEM258-205ENST00000540434 GPR37L1O60883 481 aa13.43□□□□□ -0.26
TMEM258-205ENST00000540434 CDC45O75419 566 aa13.43□□□□□ -0.26
TMEM258-205ENST00000540434 FLOT1O75955 427 aa13.43□□□□□ -0.26
TMEM258-205ENST00000540434 ANTXR2P58335 489 aa13.43□□□□□ -0.26
TMEM258-205ENST00000540434 SNAP25P60880 206 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms