RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 MYO9BQ13459 2157 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 WDFY4Q6ZS81 3184 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 ZNF532Q9HCE3 1301 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 TCRBV5S4A2TA0A5A2 114 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 B4GALT4O60513 344 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 IGSF3O75054 1194 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 ATP2A2P16615 1042 aaKnown RBP9.67□□□□□ -0.86
LRP6-204ENST00000540415 CDK8P49336 464 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 SLC9C2Q5TAH2 1124 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 CCDC144CPQ8IYA2 1237 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 CPXCR1Q8N123 301 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 MSL3Q8N5Y2 521 aaKnown RBP9.67□□□□□ -0.86
LRP6-204ENST00000540415 PPP1R13LQ8WUF5 828 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 ARNTL2Q8WYA1 636 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 ARHGAP45Q92619 1136 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.67□□□□□ -0.86
LRP6-204ENST00000540415 MTIF3Q9H2K0 278 aaKnown RBP9.67□□□□□ -0.86
LRP6-204ENST00000540415 SH2D4AQ9H788 454 aa9.67□□□□□ -0.86
LRP6-204ENST00000540415 PRRC2BQ5JSZ5 2229 aaKnown RBP9.67□□□□□ -0.86
LRP6-204ENST00000540415 NAV1Q8NEY1 1877 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 GTPBP6O43824 516 aaPredicted RBP9.66□□□□□ -0.86
LRP6-204ENST00000540415 POU3F3P20264 500 aaPredicted RBP9.66□□□□□ -0.86
LRP6-204ENST00000540415 ATP8B2P98198 1209 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 CNTN2Q02246 1040 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 ITGA7Q13683 1181 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 TMEM67Q5HYA8 995 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 DEFB128Q7Z7B8 93 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 TMEM57Q8N5G2 664 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 FRAT1Q92837 279 aaPredicted RBP9.66□□□□□ -0.86
LRP6-204ENST00000540415 AGBL1Q96MI9 1066 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 SLF1Q9BQI6 1058 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 TEX13BQ9BXU2 312 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 ABHD16BQ9H3Z7 469 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 SPC25Q9HBM1 224 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 RAVER2Q9HCJ3 691 aaKnown RBP9.66□□□□□ -0.86
LRP6-204ENST00000540415 SWAP70Q9UH65 585 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 NOP58Q9Y2X3 529 aaKnown RBP9.66□□□□□ -0.86
LRP6-204ENST00000540415 GBF1Q92538 1859 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 PARP14Q460N5 1801 aa9.66□□□□□ -0.86
LRP6-204ENST00000540415 LRRC37A2A6NM11 1700 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 PI4K2BG5E9Z4 385 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 LPXNO60711 386 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 CT47B1P0C2W7 299 aaPredicted RBP9.65□□□□□ -0.86
LRP6-204ENST00000540415 CYP2C9P11712 490 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 COPB2P35606 906 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 TAP1Q03518 808 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 GRB10Q13322 594 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 C12orf60Q5U649 245 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 NOL8Q76FK4 1167 aaKnown RBP9.65□□□□□ -0.86
LRP6-204ENST00000540415 ZNF467Q7Z7K2 595 aaPredicted RBP9.65□□□□□ -0.86
LRP6-204ENST00000540415 AACSQ86V21 672 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 HLA-CQ95604 372 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 PDGFCQ9NRA1 345 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 TRMT13Q9NUP7 481 aaKnown RBP9.65□□□□□ -0.86
LRP6-204ENST00000540415 COG5Q9UP83 839 aa9.65□□□□□ -0.86
LRP6-204ENST00000540415 GNEQ9Y223 722 aaKnown RBP9.65□□□□□ -0.86
LRP6-204ENST00000540415 COL11A1P12107 1806 aaPredicted RBP9.65□□□□□ -0.86
LRP6-204ENST00000540415 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 USP17L21D6R901 530 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 GOLIM4O00461 696 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 DYNC1LI2O43237 492 aaPredicted RBP9.64□□□□□ -0.87
LRP6-204ENST00000540415 MBD4O95243 580 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 NDUFB10O96000 172 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 SMPD1P17405 629 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 MRE11P49959 708 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 NKX3-2P78367 333 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 TNFAIP2Q03169 654 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 FSCN1Q16658 493 aaKnown RBP9.64□□□□□ -0.87
LRP6-204ENST00000540415 C16orf86Q6ZW13 317 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 TMCO2Q7Z6W1 182 aaPredicted RBP9.64□□□□□ -0.87
LRP6-204ENST00000540415 TLK2Q86UE8 772 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 STK11IPQ8N1F8 1099 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 ANKRD35Q8N283 1001 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 ANKS1AQ92625 1134 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 DNAJC2Q99543 621 aaKnown RBP9.64□□□□□ -0.87
LRP6-204ENST00000540415 KANSL2Q9H9L4 492 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 GOPCQ9HD26 462 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 IL1RAPL2Q9NP60 686 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 HOMER2Q9NSB8 354 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 EXOC6BQ9Y2D4 811 aa9.64□□□□□ -0.87
LRP6-204ENST00000540415 ZNFX1Q9P2E3 1918 aaKnown RBP9.64□□□□□ -0.87
LRP6-204ENST00000540415 LCHNA4D1U4 455 aa9.63□□□□□ -0.87
LRP6-204ENST00000540415 SOWAHBA6NEL2 793 aa9.63□□□□□ -0.87
LRP6-204ENST00000540415 RPUSD2Q8IZ73 545 aaKnown RBP9.63□□□□□ -0.87
LRP6-204ENST00000540415 GDPD5Q8WTR4 605 aa9.63□□□□□ -0.87
LRP6-204ENST00000540415 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
LRP6-204ENST00000540415 CCDC17Q96LX7 622 aa9.63□□□□□ -0.87
LRP6-204ENST00000540415 UIMC1Q96RL1 719 aa9.63□□□□□ -0.87
LRP6-204ENST00000540415 BCL11AQ9H165 835 aa9.63□□□□□ -0.87
LRP6-204ENST00000540415 ALDH8A1Q9H2A2 487 aaPredicted RBP9.63□□□□□ -0.87
LRP6-204ENST00000540415 F5H6K3 240 aa9.62□□□□□ -0.87
LRP6-204ENST00000540415 ATP2A1O14983 1001 aa9.62□□□□□ -0.87
LRP6-204ENST00000540415 KLRC3Q07444 240 aa9.62□□□□□ -0.87
LRP6-204ENST00000540415 CTR9Q6PD62 1173 aa9.62□□□□□ -0.87
LRP6-204ENST00000540415 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.62□□□□□ -0.87
LRP6-204ENST00000540415 EEPD1Q7L9B9 569 aa9.62□□□□□ -0.87
LRP6-204ENST00000540415 FBXO16Q8IX29 292 aaPredicted RBP9.62□□□□□ -0.87
LRP6-204ENST00000540415 FAM133AQ8N9E0 248 aa9.62□□□□□ -0.87
LRP6-204ENST00000540415 PRPF38AQ8NAV1 312 aaKnown RBP9.62□□□□□ -0.87
LRP6-204ENST00000540415 CHMP4CQ96CF2 233 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms