RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 TMEM63CQ9P1W3 806 aa8.65□□□□□ -1.02
NECAP1-204ENST00000540083 MYH2Q9UKX2 1941 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 MAST2Q6P0Q8 1798 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 CCDC196A0A1B0GTZ2 297 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 CLRN2A0PK11 232 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 NEMFO60524 1076 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 CPP00450 1065 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 NR3C2P08235 984 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 HNRNPH2P55795 449 aaKnown RBP8.64□□□□□ -1.03
NECAP1-204ENST00000540083 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
NECAP1-204ENST00000540083 DHX8Q14562 1220 aaKnown RBP8.64□□□□□ -1.03
NECAP1-204ENST00000540083 RASA3Q14644 834 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 GRIK5Q16478 980 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 MCMDC2Q4G0Z9 681 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 TSHZ3Q63HK5 1081 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 ARMC9Q7Z3E5 817 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 TTC6Q86TZ1 520 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 USP48Q86UV5 1035 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 ZSCAN29Q8IWY8 852 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-204ENST00000540083 GOLGA5Q8TBA6 731 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 PLCD4Q9BRC7 762 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 SENP2Q9HC62 589 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 KCNG1Q9UIX4 513 aa8.64□□□□□ -1.03
NECAP1-204ENST00000540083 ZNF646O15015 1829 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-204ENST00000540083 TCRBV5S4A2TA0A5A2 114 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 SHTN1A0MZ66 631 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 SYCE3A1L190 88 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 TCP10L2B9ZVM9 353 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 SLC3A2P08195 630 aaKnown RBP8.63□□□□□ -1.03
NECAP1-204ENST00000540083 TIMP2P16035 220 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 ATP2B1P20020 1258 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 SDSP20132 328 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 SSR1P43307 286 aaKnown RBP8.63□□□□□ -1.03
NECAP1-204ENST00000540083 NT5C2P49902 561 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 ZMYM1Q5SVZ6 1142 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 MAP1SQ66K74 1059 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-204ENST00000540083 NBPF11Q86T75 865 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 FOXP4Q8IVH2 680 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-204ENST00000540083 ADAM32Q8TC27 787 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 EDC3Q96F86 508 aaKnown RBP8.63□□□□□ -1.03
NECAP1-204ENST00000540083 FAM107BQ9H098 131 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 PI4KBQ9UBF8 816 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 HERC5Q9UII4 1024 aaKnown RBP8.63□□□□□ -1.03
NECAP1-204ENST00000540083 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-204ENST00000540083 NDUFB9Q9Y6M9 179 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 ECM29Q5VYK3 1845 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 DOCK2Q92608 1830 aa8.63□□□□□ -1.03
NECAP1-204ENST00000540083 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 PATL2C9JE40 543 aaKnown RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 MYO1CO00159 1063 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 RPS6KA5O75582 802 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 MBD4O95243 580 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 EGFRP00533 1210 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 POLR3DP05423 398 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 FSHRP23945 695 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 USP8P40818 1118 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 MAGEA9P43362 315 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 IREB2P48200 963 aaKnown RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 RHBDL3P58872 404 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 MAP2K1Q02750 393 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 PICALMQ13492 652 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 TTC31Q49AM3 519 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 CCDC183Q5T5S1 534 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 SRLQ86TD4 932 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 MIGA1Q8NAN2 632 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 SH3RF3Q8TEJ3 882 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 TGFBRAP1Q8WUH2 860 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 PPM1EQ8WY54 764 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 SLC10A4Q96EP9 437 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 RIOK1Q9BRS2 568 aaKnown RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 GLIS2Q9BZE0 524 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 OSBPL5Q9H0X9 879 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 ARPP21Q9UBL0 812 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 CDV3Q9UKY7 258 aaKnown RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 JRKLQ9Y4A0 524 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 SLC4A4Q9Y6R1 1079 aa8.62□□□□□ -1.03
NECAP1-204ENST00000540083 COL2A1P02458 1487 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-204ENST00000540083 MYH7P12883 1935 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 PPP1R12AO14974 1030 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-204ENST00000540083 GPAA1O43292 621 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 WDHD1O75717 1129 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-204ENST00000540083 CELF2O95319 508 aaKnown RBP8.61□□□□□ -1.03
NECAP1-204ENST00000540083 ZIC2O95409 532 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-204ENST00000540083 TPM1P09493 284 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 C1QTNF8P60827 252 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 TCP10Q12799 353 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 ZKSCAN8Q15776 578 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-204ENST00000540083 CT47A1Q5JQC4 288 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-204ENST00000540083 CRACR2BQ8N4Y2 399 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-204ENST00000540083 MSL3Q8N5Y2 521 aaKnown RBP8.61□□□□□ -1.03
NECAP1-204ENST00000540083 ZNF384Q8TF68 577 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 ITPKCQ96DU7 683 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 CDCA5Q96FF9 252 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 HHIPL1Q96JK4 782 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 TRIM47Q96LD4 638 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 CSRNP1Q96S65 589 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 STRBPQ96SI9 672 aaKnown RBP8.61□□□□□ -1.03
NECAP1-204ENST00000540083 ZNF341Q9BYN7 854 aa8.61□□□□□ -1.03
NECAP1-204ENST00000540083 GBA2Q9HCG7 927 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms