RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 GADL1Q6ZQY3 521 aa7.62□□□□□ -1.19
SNHG1-212ENST00000539975 TRMT44Q8IYL2 757 aaKnown RBP7.62□□□□□ -1.19
SNHG1-212ENST00000539975 NCOA7Q8NI08 942 aa7.62□□□□□ -1.19
SNHG1-212ENST00000539975 MAP4K1Q92918 833 aa7.62□□□□□ -1.19
SNHG1-212ENST00000539975 CDK15Q96Q40 435 aa7.62□□□□□ -1.19
SNHG1-212ENST00000539975 UBAC1Q9BSL1 405 aa7.62□□□□□ -1.19
SNHG1-212ENST00000539975 C1QTNF2Q9BXJ5 285 aa7.62□□□□□ -1.19
SNHG1-212ENST00000539975 ISY1Q9ULR0 285 aaKnown RBP7.62□□□□□ -1.19
SNHG1-212ENST00000539975 STX8Q9UNK0 236 aa7.62□□□□□ -1.19
SNHG1-212ENST00000539975 RBM8AQ9Y5S9 174 aaKnown RBP7.62□□□□□ -1.19
SNHG1-212ENST00000539975 ZNF646O15015 1829 aaPredicted RBP7.62□□□□□ -1.19
SNHG1-212ENST00000539975 J3QL48 77 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 EPB41L2O43491 1005 aaKnown RBP7.61□□□□□ -1.19
SNHG1-212ENST00000539975 ORC4O43929 436 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 AOC2O75106 756 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 TTLL1O95922 423 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 HMGB1P09429 215 aaKnown RBP7.61□□□□□ -1.19
SNHG1-212ENST00000539975 SMCPP49901 116 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-212ENST00000539975 BACE1P56817 501 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 SEPT2Q15019 361 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 USP17L2Q6R6M4 530 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 SLC44A5Q8NCS7 719 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 STAG1Q8WVM7 1258 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 ARHGAP9Q9BRR9 750 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 WDR18Q9BV38 432 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 DNAJC18Q9H819 358 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 CLIP2Q9UDT6 1046 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 AFG3L2Q9Y4W6 797 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 CTDP1Q9Y5B0 961 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-212ENST00000539975 WASF2Q9Y6W5 498 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 SSC5DA1L4H1 1573 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 DOCK2Q92608 1830 aa7.61□□□□□ -1.19
SNHG1-212ENST00000539975 ROBO3Q96MS0 1386 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 FAM155AB1AL88 458 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-212ENST00000539975 AKR1B1P15121 316 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 RASA1P20936 1047 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 PSMA5P28066 241 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 TM4SF4P48230 202 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 HMGCS2P54868 508 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 IRX3P78415 501 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-212ENST00000539975 PTH1RQ03431 593 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 ARHGEF6Q15052 776 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 ZYXQ15942 572 aaKnown RBP7.6□□□□□ -1.19
SNHG1-212ENST00000539975 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 FAM47AQ5JRC9 791 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 CCAR1Q8IX12 1150 aaKnown RBP7.6□□□□□ -1.19
SNHG1-212ENST00000539975 NEDD1Q8NHV4 660 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 SMCR8Q8TEV9 937 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-212ENST00000539975 LPAR1Q92633 364 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 TTC14Q96N46 770 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 ZFYVE28Q9HCC9 887 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 PRM3Q9NNZ6 103 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 CDV3Q9UKY7 258 aaKnown RBP7.6□□□□□ -1.19
SNHG1-212ENST00000539975 KCNH4Q9UQ05 1017 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 MAP4K5Q9Y4K4 846 aa7.6□□□□□ -1.19
SNHG1-212ENST00000539975 ECM29Q5VYK3 1845 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 A0A0G2JLL6 359 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-212ENST00000539975 E7EWF7 191 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 TRPA1O75762 1119 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 CYP21A2P08686 494 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 SLURP2P0DP57 97 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 EEF2P13639 858 aaKnown RBP7.59□□□□□ -1.19
SNHG1-212ENST00000539975 MCM5P33992 734 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 IKQ13123 557 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-212ENST00000539975 KIF22Q14807 665 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 CREB3L3Q68CJ9 461 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 SYNE3Q6ZMZ3 975 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 PRRT2Q7Z6L0 340 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-212ENST00000539975 ANKRD23Q86SG2 305 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 TMTC2Q8N394 836 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 DNAJC5GQ8N7S2 189 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 EPS8L1Q8TE68 723 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 CEP95Q96GE4 821 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 PARK7Q99497 189 aaKnown RBP7.59□□□□□ -1.19
SNHG1-212ENST00000539975 TANGO6Q9C0B7 1094 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 LSG1Q9H089 658 aaKnown RBP7.59□□□□□ -1.19
SNHG1-212ENST00000539975 KIAA1683Q9H0B3 1180 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 KAT14Q9H8E8 782 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 CWC22Q9HCG8 908 aaKnown RBP7.59□□□□□ -1.19
SNHG1-212ENST00000539975 ZCCHC17Q9NP64 241 aaKnown RBP7.59□□□□□ -1.19
SNHG1-212ENST00000539975 SAGE1Q9NXZ1 904 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 MTMR4Q9NYA4 1195 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 NYAP2Q9P242 653 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 SYNPO2Q9UMS6 1093 aa7.59□□□□□ -1.19
SNHG1-212ENST00000539975 B4E1Z4 1266 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 USP17L15C9J2P7 530 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 USP17L13C9JLJ4 530 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 USP17L11C9JVI0 530 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 USP17L18D6R9N7 530 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 USP17L22D6RA61 530 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 USP17L17D6RBQ6 530 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 USP17L19D6RCP7 530 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 USP17L20D6RJB6 530 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 PDHXO00330 501 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 IFIT3O14879 490 aaKnown RBP7.58□□□□□ -1.2
SNHG1-212ENST00000539975 SLC27A2O14975 620 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 FOXP2O15409 715 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 ADH1CP00326 375 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 FGRP09769 529 aa7.58□□□□□ -1.2
SNHG1-212ENST00000539975 TOP1P11387 765 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms