RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MTMR8Q96EF0 704 aa25.58■■□□□ 1.69
HOMER3-204ENST00000539827 PGAP2Q9UHJ9 254 aa25.58■■□□□ 1.69
HOMER3-204ENST00000539827 ZBTB5O15062 677 aa25.57■■□□□ 1.68
HOMER3-204ENST00000539827 FOXN1O15353 648 aa25.57■■□□□ 1.68
HOMER3-204ENST00000539827 ADCY7P51828 1080 aa25.57■■□□□ 1.68
HOMER3-204ENST00000539827 NONOQ15233 471 aaKnown RBP eCLIP25.57■■□□□ 1.68
HOMER3-204ENST00000539827 MICALL2Q8IY33 904 aa25.57■■□□□ 1.68
HOMER3-204ENST00000539827 GMCL1P1Q8NEA9 526 aa25.57■■□□□ 1.68
HOMER3-204ENST00000539827 FZD9O00144 591 aa25.56■■□□□ 1.68
HOMER3-204ENST00000539827 CAVIN2O95810 425 aa25.56■■□□□ 1.68
HOMER3-204ENST00000539827 ZRSR1Q15695 479 aaKnown RBP25.56■■□□□ 1.68
HOMER3-204ENST00000539827 ARFGEF1Q9Y6D6 1849 aa25.56■■□□□ 1.68
HOMER3-204ENST00000539827 IQCB1Q15051 598 aa25.56■■□□□ 1.68
HOMER3-204ENST00000539827 ISM2Q6H9L7 571 aa25.56■■□□□ 1.68
HOMER3-204ENST00000539827 SAMD7Q7Z3H4 446 aa25.56■■□□□ 1.68
HOMER3-204ENST00000539827 REXO1Q8N1G1 1221 aaKnown RBP25.56■■□□□ 1.68
HOMER3-204ENST00000539827 ZBTB21Q9ULJ3 1066 aa25.56■■□□□ 1.68
HOMER3-204ENST00000539827 A0A087X0B3 334 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 TBC1D12O60347 775 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 ECE1P42892 770 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 NLRP12P59046 1061 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 ACER1Q8TDN7 264 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 TMEM60Q9H2L4 133 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.55■■□□□ 1.68
HOMER3-204ENST00000539827 CNOT7Q9UIV1 285 aaKnown RBP25.55■■□□□ 1.68
HOMER3-204ENST00000539827 TNNI2P48788 182 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 RASA3Q14644 834 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 QRICH1Q2TAL8 776 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 TBC1D10BQ4KMP7 808 aaPredicted RBP25.55■■□□□ 1.68
HOMER3-204ENST00000539827 GMCL1Q96IK5 515 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 TUBE1Q9UJT0 475 aa25.55■■□□□ 1.68
HOMER3-204ENST00000539827 ACTN4O43707 911 aaKnown RBP25.54■■□□□ 1.68
HOMER3-204ENST00000539827 SNAP25P60880 206 aa25.54■■□□□ 1.68
HOMER3-204ENST00000539827 LETM2Q2VYF4 491 aa25.54■■□□□ 1.68
HOMER3-204ENST00000539827 DPCR1Q3MIW9 517 aa25.54■■□□□ 1.68
HOMER3-204ENST00000539827 PPP1R18Q6NYC8 613 aa25.54■■□□□ 1.68
HOMER3-204ENST00000539827 CEP57L1Q8IYX8 460 aa25.54■■□□□ 1.68
HOMER3-204ENST00000539827 DHX58Q96C10 678 aa25.54■■□□□ 1.68
HOMER3-204ENST00000539827 ARHGEF10LQ9HCE6 1279 aa25.54■■□□□ 1.68
HOMER3-204ENST00000539827 ASTN2O75129 1339 aaPredicted RBP25.54■■□□□ 1.68
HOMER3-204ENST00000539827 ZNF541Q9H0D2 1346 aa25.54■■□□□ 1.68
HOMER3-204ENST00000539827 BMP3P12645 472 aa25.53■■□□□ 1.68
HOMER3-204ENST00000539827 MDM2Q00987 491 aaPredicted RBP25.53■■□□□ 1.68
HOMER3-204ENST00000539827 CDC37Q16543 378 aaPredicted RBP25.53■■□□□ 1.68
HOMER3-204ENST00000539827 GRAMD1CQ8IYS0 662 aa25.53■■□□□ 1.68
HOMER3-204ENST00000539827 SPICE1Q8N0Z3 855 aa25.53■■□□□ 1.68
HOMER3-204ENST00000539827 TBCKQ8TEA7 893 aa25.53■■□□□ 1.68
HOMER3-204ENST00000539827 TMEM232C9JQI7 657 aa25.53■■□□□ 1.68
HOMER3-204ENST00000539827 PRR29P0C7W0 189 aa25.53■■□□□ 1.68
HOMER3-204ENST00000539827 IKQ13123 557 aaPredicted RBP25.53■■□□□ 1.68
HOMER3-204ENST00000539827 UBE2SQ16763 222 aa25.53■■□□□ 1.68
HOMER3-204ENST00000539827 ARL6IP4Q66PJ3 421 aaKnown RBP25.53■■□□□ 1.68
HOMER3-204ENST00000539827 DPF2Q92785 391 aa25.53■■□□□ 1.68
HOMER3-204ENST00000539827 RIC8AQ9NPQ8 531 aa25.53■■□□□ 1.68
HOMER3-204ENST00000539827 MMP14P50281 582 aa25.52■■□□□ 1.68
HOMER3-204ENST00000539827 NEK8Q86SG6 692 aa25.52■■□□□ 1.68
HOMER3-204ENST00000539827 ELOA2Q8IYF1 753 aaPredicted RBP25.52■■□□□ 1.68
HOMER3-204ENST00000539827 FAM43AQ8N2R8 423 aa25.52■■□□□ 1.68
HOMER3-204ENST00000539827 PCDHA5Q9Y5H7 936 aa25.52■■□□□ 1.68
HOMER3-204ENST00000539827 CCNT1O60563 726 aaKnown RBP25.51■■□□□ 1.67
HOMER3-204ENST00000539827 CAP2P40123 477 aa25.51■■□□□ 1.67
HOMER3-204ENST00000539827 KIAA1755Q5JYT7 1200 aa25.51■■□□□ 1.67
HOMER3-204ENST00000539827 POSTNQ15063 836 aa25.51■■□□□ 1.67
HOMER3-204ENST00000539827 SYDE2Q5VT97 1194 aa25.51■■□□□ 1.67
HOMER3-204ENST00000539827 ARHGAP27Q6ZUM4 889 aa25.51■■□□□ 1.67
HOMER3-204ENST00000539827 DHX40Q8IX18 779 aaKnown RBP25.51■■□□□ 1.67
HOMER3-204ENST00000539827 HOOK1Q9UJC3 728 aaKnown RBP25.51■■□□□ 1.67
HOMER3-204ENST00000539827 GOLGA6L19H0YKK7 550 aa25.5■■□□□ 1.67
HOMER3-204ENST00000539827 AOPEPQ8N6M6 819 aa25.5■■□□□ 1.67
HOMER3-204ENST00000539827 NAT10Q9H0A0 1025 aaKnown RBP25.5■■□□□ 1.67
HOMER3-204ENST00000539827 SPON1Q9HCB6 807 aa25.5■■□□□ 1.67
HOMER3-204ENST00000539827 TMX2Q9Y320 296 aa25.5■■□□□ 1.67
HOMER3-204ENST00000539827 BECN2A8MW95 431 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 DTHD1Q6ZMT9 781 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 CCDC84Q86UT8 332 aaPredicted RBP25.49■■□□□ 1.67
HOMER3-204ENST00000539827 CUL5Q93034 780 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 TEPSINQ96N21 525 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 HACL1Q9UJ83 578 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 PCDHA1Q9Y5I3 950 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 LONP1P36776 959 aaKnown RBP25.49■■□□□ 1.67
HOMER3-204ENST00000539827 MAP3K10Q02779 954 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 KIF4BQ2VIQ3 1234 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 KANK3Q6NY19 840 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 SYNPO2Q9UMS6 1093 aa25.49■■□□□ 1.67
HOMER3-204ENST00000539827 MRPL12P52815 198 aaKnown RBP25.48■■□□□ 1.67
HOMER3-204ENST00000539827 TNFAIP1Q13829 316 aa25.48■■□□□ 1.67
HOMER3-204ENST00000539827 ZYXQ15942 572 aaKnown RBP25.48■■□□□ 1.67
HOMER3-204ENST00000539827 PSTPIP2Q9H939 334 aa25.48■■□□□ 1.67
HOMER3-204ENST00000539827 PTMAP06454 111 aaKnown RBP25.47■■□□□ 1.67
HOMER3-204ENST00000539827 CDC25AP30304 524 aa25.47■■□□□ 1.67
HOMER3-204ENST00000539827 CLK2P49760 499 aaKnown RBP25.47■■□□□ 1.67
HOMER3-204ENST00000539827 GOPCQ9HD26 462 aa25.47■■□□□ 1.67
HOMER3-204ENST00000539827 SLFN14P0C7P3 912 aa25.47■■□□□ 1.67
HOMER3-204ENST00000539827 AFMP43652 599 aa25.47■■□□□ 1.67
HOMER3-204ENST00000539827 FAM83BQ5T0W9 1011 aa25.47■■□□□ 1.67
HOMER3-204ENST00000539827 BTNL9Q6UXG8 535 aa25.47■■□□□ 1.67
HOMER3-204ENST00000539827 GLIS2Q9BZE0 524 aaPredicted RBP25.47■■□□□ 1.67
HOMER3-204ENST00000539827 LAD1O00515 517 aa25.46■■□□□ 1.67
HOMER3-204ENST00000539827 EDIL3O43854 480 aa25.46■■□□□ 1.67
HOMER3-204ENST00000539827 NEMFO60524 1076 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms