RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 SPEF2Q9C093 1822 aa13.33□□□□□ -0.28
NEK6-212ENST00000539416 PSMD14O00487 310 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 PRC1O43663 620 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 HOXA10P31260 410 aaPredicted RBP13.32□□□□□ -0.28
NEK6-212ENST00000539416 CCT6AP40227 531 aaKnown RBP13.32□□□□□ -0.28
NEK6-212ENST00000539416 C11orf91Q3C1V1 193 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 NAA35Q5VZE5 725 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 KCTD16Q68DU8 428 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.32□□□□□ -0.28
NEK6-212ENST00000539416 RFX7Q2KHR2 1363 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 RTN2O75298 545 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 MRPL12P52815 198 aaKnown RBP13.32□□□□□ -0.28
NEK6-212ENST00000539416 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
NEK6-212ENST00000539416 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 SPATA1Q5VX52 437 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 MSL1Q68DK7 614 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 CCDC51Q96ER9 411 aa13.32□□□□□ -0.28
NEK6-212ENST00000539416 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.32□□□□□ -0.28
NEK6-212ENST00000539416 SKAP2O75563 359 aaPredicted RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 PDE8BO95263 885 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 CASP1P29466 404 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 PAPD7Q5XG87 772 aaKnown RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 DMGDHQ9UI17 866 aaKnown RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 UBE2Q2LH0YL09 131 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 SSBP05455 408 aaKnown RBP eCLIP13.31□□□□□ -0.28
NEK6-212ENST00000539416 RXRAP19793 462 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 ERCC5P28715 1186 aaPredicted RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 CCNHP51946 323 aaPredicted RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 SEC24CP53992 1094 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 ANTXR2P58335 489 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 GUCY1A3Q02108 690 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 TBC1D8BQ0IIM8 1120 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 IFT88Q13099 833 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 GRAPQ13588 217 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 CRYMQ14894 314 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 ZMYM1Q5SVZ6 1142 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 CDKAL1Q5VV42 579 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 SMYD4Q8IYR2 804 aaPredicted RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 FBXL16Q8N461 479 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 GRAPLQ8TC17 118 aaPredicted RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 ZNF473Q8WTR7 871 aaKnown RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 JAKMIP2Q96AA8 810 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 RBM17Q96I25 401 aaKnown RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 RNPC3Q96LT9 517 aaKnown RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 CRAMP1Q96RY5 1269 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 HELLSQ9NRZ9 838 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 EPN1Q9Y6I3 576 aaPredicted RBP13.31□□□□□ -0.28
NEK6-212ENST00000539416 MAST3O60307 1309 aa13.31□□□□□ -0.28
NEK6-212ENST00000539416 FGFR2P21802 821 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 LSP1P33241 339 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 CLNS1AP54105 237 aaKnown RBP13.3□□□□□ -0.28
NEK6-212ENST00000539416 E2F5Q15329 346 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 USP49Q70CQ1 688 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 PHKBQ93100 1093 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 AIDAQ96BJ3 306 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 NUP88Q99567 741 aaPredicted RBP13.3□□□□□ -0.28
NEK6-212ENST00000539416 TRIM6Q9C030 488 aaPredicted RBP13.3□□□□□ -0.28
NEK6-212ENST00000539416 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 IRF6O14896 467 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 OPA1O60313 960 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 NDUFA10O95299 355 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 TAF1P21675 1872 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 KRT9P35527 623 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 PDE6BP35913 854 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 TIMM10P62072 90 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 HDLBPQ00341 1268 aaKnown RBP13.3□□□□□ -0.28
NEK6-212ENST00000539416 APBA1Q02410 837 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 MAP2K1Q02750 393 aaPredicted RBP13.3□□□□□ -0.28
NEK6-212ENST00000539416 CUL4BQ13620 913 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 YTHDF3Q7Z739 585 aaKnown RBP13.3□□□□□ -0.28
NEK6-212ENST00000539416 ELOA2Q8IYF1 753 aaPredicted RBP13.3□□□□□ -0.28
NEK6-212ENST00000539416 RPGRQ92834 1020 aaKnown RBP13.3□□□□□ -0.28
NEK6-212ENST00000539416 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 ARAP2Q8WZ64 1704 aa13.3□□□□□ -0.28
NEK6-212ENST00000539416 M0R2C6 588 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 HERVK_113P62684 666 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 SLC7A5Q01650 507 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 PPARAQ07869 468 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 SPRED3Q2MJR0 410 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 FILIP1LQ4L180 1135 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 SPATS2Q86XZ4 545 aaKnown RBP13.29□□□□□ -0.28
NEK6-212ENST00000539416 TRIML1Q8N9V2 468 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 NEUROD6Q96NK8 337 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 LRRC1Q9BTT6 524 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 VPS16Q9H269 839 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 MINPP1Q9UNW1 487 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 ACTN4O43707 911 aaKnown RBP13.29□□□□□ -0.28
NEK6-212ENST00000539416 EPB41P11171 864 aaKnown RBP13.29□□□□□ -0.28
NEK6-212ENST00000539416 CHRNDQ07001 517 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 CKAP4Q07065 602 aaKnown RBP13.29□□□□□ -0.28
NEK6-212ENST00000539416 PUM3Q15397 648 aaKnown RBP13.29□□□□□ -0.28
NEK6-212ENST00000539416 CCDC122Q5T0U0 273 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 TLDC1Q6P9B6 456 aa13.29□□□□□ -0.28
NEK6-212ENST00000539416 MB21D2Q8IYB1 491 aaPredicted RBP13.29□□□□□ -0.28
NEK6-212ENST00000539416 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.29□□□□□ -0.28
NEK6-212ENST00000539416 PAGR1Q9BTK6 254 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms