RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 KLRF2D3W0D1 207 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 M0R2N6 131 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 SPTLC2O15270 562 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 USP2O75604 605 aaPredicted RBP10.12□□□□□ -0.79
DDB1-213ENST00000539332 KIF20AO95235 890 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 KRT2P35908 639 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 TOB1P50616 345 aaPredicted RBP10.12□□□□□ -0.79
DDB1-213ENST00000539332 ZNF543Q08ER8 600 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 NR5A1Q13285 461 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 PRKG1Q13976 671 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 STK38Q15208 465 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 RILPL1Q5EBL4 403 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 AXDND1Q5T1B0 1012 aaPredicted RBP10.12□□□□□ -0.79
DDB1-213ENST00000539332 USP17L2Q6R6M4 530 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 LDHDQ86WU2 507 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.12□□□□□ -0.79
DDB1-213ENST00000539332 PIBF1Q8WXW3 757 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 ZFP91Q96JP5 570 aaPredicted RBP10.12□□□□□ -0.79
DDB1-213ENST00000539332 DDX19AQ9NUU7 478 aaKnown RBP10.12□□□□□ -0.79
DDB1-213ENST00000539332 PCDHA7Q9UN72 937 aa10.12□□□□□ -0.79
DDB1-213ENST00000539332 PTPRFP10586 1907 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 FAM237AA0A1B0GTK4 181 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 hCG_1984214I3L0E3 225 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 STXBP3O00186 592 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 GOLGA8HP0CJ92 632 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 CALML3P27482 149 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 NF2P35240 595 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 ECE1P42892 770 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 GALNT17Q6IS24 598 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 CCDC84Q86UT8 332 aaPredicted RBP10.11□□□□□ -0.79
DDB1-213ENST00000539332 SCYL3Q8IZE3 742 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 ZNF713Q8N859 430 aaPredicted RBP10.11□□□□□ -0.79
DDB1-213ENST00000539332 GMCL1P1Q8NEA9 526 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 ENGASEQ8NFI3 743 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 ACER1Q8TDN7 264 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 MTMR8Q96EF0 704 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 FUCA2Q9BTY2 467 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 ARHGEF10LQ9HCE6 1279 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 BARHL2Q9NY43 387 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 TMX2Q9Y320 296 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 TRPM7Q96QT4 1865 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 SMCHD1A6NHR9 2005 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 ESYT2A0FGR8 921 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 SYCE3A1L190 88 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 GOLGA6L4A6NEF3 574 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 F5H6K3 240 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 TRAF5O00463 557 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 CEBPZQ03701 1054 aaKnown RBP10.11□□□□□ -0.79
DDB1-213ENST00000539332 KLRC3Q07444 240 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 GNL2Q13823 731 aaKnown RBP10.11□□□□□ -0.79
DDB1-213ENST00000539332 SF3A1Q15459 793 aaKnown RBP10.11□□□□□ -0.79
DDB1-213ENST00000539332 GPATCH4Q5T3I0 446 aaKnown RBP10.11□□□□□ -0.79
DDB1-213ENST00000539332 WWC2Q6AWC2 1192 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 TYW1BQ6NUM6 668 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.11□□□□□ -0.79
DDB1-213ENST00000539332 CCDC148Q8NFR7 591 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 DCAF4Q8WV16 495 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 GOLPH3LQ9H4A5 285 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 CLSTN2Q9H4D0 955 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 BRMS1Q9HCU9 246 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 PICK1Q9NRD5 415 aa10.11□□□□□ -0.79
DDB1-213ENST00000539332 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.11□□□□□ -0.79
DDB1-213ENST00000539332 NR1I2O75469 434 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 NDUFB10O96000 172 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 ME1P48163 572 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 IREB2P48200 963 aaKnown RBP10.1□□□□□ -0.79
DDB1-213ENST00000539332 TRAPPC10P48553 1259 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 MAP3K9P80192 1104 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 FAM160A1Q05DH4 1040 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 SNW1Q13573 536 aaKnown RBP10.1□□□□□ -0.79
DDB1-213ENST00000539332 VGLL4Q14135 290 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 EARS2Q5JPH6 523 aaKnown RBP10.1□□□□□ -0.79
DDB1-213ENST00000539332 NOL9Q5SY16 702 aaKnown RBP10.1□□□□□ -0.79
DDB1-213ENST00000539332 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 SLFN13Q68D06 897 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 JMYQ8N9B5 988 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 BICD2Q8TD16 824 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 MRPS27Q92552 414 aaKnown RBP10.1□□□□□ -0.79
DDB1-213ENST00000539332 GMCL1Q96IK5 515 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 SH2D4AQ9H788 454 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 DACT1Q9NYF0 836 aa10.1□□□□□ -0.79
DDB1-213ENST00000539332 RBBP6Q7Z6E9 1792 aaKnown RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 PTPRAP18433 802 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 CMA1P23946 247 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 SLC1A4P43007 532 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 FMR1Q06787 632 aaKnown RBP eCLIP10.09□□□□□ -0.794e-7■■■□□ 16.7
DDB1-213ENST00000539332 TTLL12Q14166 644 aaPredicted RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 MAP3K11Q16584 847 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 DNTTIP2Q5QJE6 756 aaKnown RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 CCAR1Q8IX12 1150 aaKnown RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 BLIDQ8IZY5 108 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 FMR1NBQ8N0W7 255 aaPredicted RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 GPKOWQ92917 476 aaPredicted RBP eCLIP10.09□□□□□ -0.79
DDB1-213ENST00000539332 RRP36Q96EU6 259 aaKnown RBP10.09□□□□□ -0.79
DDB1-213ENST00000539332 ZMYND12Q9H0C1 365 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 NUP62CLQ9H1M0 184 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 GOPCQ9HD26 462 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 SPTLC3Q9NUV7 552 aa10.09□□□□□ -0.79
DDB1-213ENST00000539332 PCDHA4Q9UN74 947 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms