RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PPFIBP1Q86W92 1011 aa9.19□□□□□ -0.94
CCDC7-209ENST00000539197 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
CCDC7-209ENST00000539197 FAM86C1Q9NVL1 165 aa9.19□□□□□ -0.94
CCDC7-209ENST00000539197 SUCOQ9UBS9 1254 aaKnown RBP9.19□□□□□ -0.94
CCDC7-209ENST00000539197 PCDHGB7Q9Y5F8 929 aa9.19□□□□□ -0.94
CCDC7-209ENST00000539197 A0A1W2PQ45 241 aaPredicted RBP9.18□□□□□ -0.94
CCDC7-209ENST00000539197 A0A1W2PQY0 241 aa9.18□□□□□ -0.94
CCDC7-209ENST00000539197 NUDT19A8MXV4 375 aa9.18□□□□□ -0.94
CCDC7-209ENST00000539197 AFF3P51826 1226 aaKnown RBP9.18□□□□□ -0.94
CCDC7-209ENST00000539197 ZNF394Q53GI3 561 aa9.18□□□□□ -0.94
CCDC7-209ENST00000539197 TMEFF1Q8IYR6 380 aa9.18□□□□□ -0.94
CCDC7-209ENST00000539197 NUP43Q8NFH3 380 aa9.18□□□□□ -0.94
CCDC7-209ENST00000539197 DACT3Q96B18 629 aaPredicted RBP9.18□□□□□ -0.94
CCDC7-209ENST00000539197 DHRS1Q96LJ7 313 aa9.18□□□□□ -0.94
CCDC7-209ENST00000539197 IMPACTQ9P2X3 320 aa9.18□□□□□ -0.94
CCDC7-209ENST00000539197 ZNF16P17020 682 aaPredicted RBP9.17□□□□□ -0.94
CCDC7-209ENST00000539197 NCKAP1LP55160 1127 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 CYP4F8P98187 520 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 RAB3GAP1Q15042 981 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 ZYXQ15942 572 aaKnown RBP9.17□□□□□ -0.94
CCDC7-209ENST00000539197 DCAF15Q66K64 600 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 RUFY4Q6ZNE9 571 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 TMC6Q7Z403 805 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 CCDC144CPQ8IYA2 1237 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 C7orf61Q8IZ16 206 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 MZB1Q8WU39 189 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 DSCC1Q9BVC3 393 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 ZNRF3Q9ULT6 936 aa9.17□□□□□ -0.94
CCDC7-209ENST00000539197 H0Y8X5 98 aa9.16□□□□□ -0.94
CCDC7-209ENST00000539197 IRS4O14654 1257 aaPredicted RBP9.16□□□□□ -0.94
CCDC7-209ENST00000539197 GSNP06396 782 aa9.16□□□□□ -0.94
CCDC7-209ENST00000539197 MSL3P1P0C860 447 aa9.16□□□□□ -0.94
CCDC7-209ENST00000539197 INTS3Q68E01 1043 aaKnown RBP9.16□□□□□ -0.94
CCDC7-209ENST00000539197 IGDCC3Q8IVU1 814 aa9.16□□□□□ -0.94
CCDC7-209ENST00000539197 BRF1Q92994 677 aa9.16□□□□□ -0.94
CCDC7-209ENST00000539197 SLC12A9Q9BXP2 914 aa9.16□□□□□ -0.94
CCDC7-209ENST00000539197 ACSL6Q9UKU0 697 aa9.16□□□□□ -0.94
CCDC7-209ENST00000539197 SASH1O94885 1247 aa9.15□□□□□ -0.94
CCDC7-209ENST00000539197 GSTM1P09488 218 aa9.15□□□□□ -0.94
CCDC7-209ENST00000539197 AXDND1Q5T1B0 1012 aaPredicted RBP9.15□□□□□ -0.94
CCDC7-209ENST00000539197 LDHDQ86WU2 507 aa9.15□□□□□ -0.94
CCDC7-209ENST00000539197 BACH2Q9BYV9 841 aa9.15□□□□□ -0.94
CCDC7-209ENST00000539197 TNFRSF12AQ9NP84 129 aa9.15□□□□□ -0.94
CCDC7-209ENST00000539197 PPT2Q9UMR5 302 aa9.15□□□□□ -0.94
CCDC7-209ENST00000539197 TP53P04637 393 aaPredicted RBP9.14□□□□□ -0.95
CCDC7-209ENST00000539197 LCE5AQ5TCM9 118 aa9.14□□□□□ -0.95
CCDC7-209ENST00000539197 CNKSR3Q6P9H4 555 aa9.14□□□□□ -0.95
CCDC7-209ENST00000539197 USP48Q86UV5 1035 aa9.14□□□□□ -0.95
CCDC7-209ENST00000539197 KRTAP9-3Q9BYQ3 159 aa9.14□□□□□ -0.95
CCDC7-209ENST00000539197 FOXD2O60548 495 aaPredicted RBP9.13□□□□□ -0.95
CCDC7-209ENST00000539197 IMPDH2P12268 514 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 ZNF76P36508 570 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 PMS1P54277 932 aaKnown RBP9.13□□□□□ -0.95
CCDC7-209ENST00000539197 ZNF445P59923 1031 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 FANCCQ00597 558 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 MVKQ03426 396 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 NFIXQ14938 502 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 CWF19L1Q69YN2 538 aaKnown RBP9.13□□□□□ -0.95
CCDC7-209ENST00000539197 RPTNQ6XPR3 784 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 NAT16Q8N8M0 369 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 XYLT2Q9H1B5 865 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 HCFC2Q9Y5Z7 792 aa9.13□□□□□ -0.95
CCDC7-209ENST00000539197 A0A1W2PQ27 194 aa9.12□□□□□ -0.95
CCDC7-209ENST00000539197 A0A1W2PQ64 194 aa9.12□□□□□ -0.95
CCDC7-209ENST00000539197 A0A1W2PQC6 194 aa9.12□□□□□ -0.95
CCDC7-209ENST00000539197 A0A1W2PQD8 194 aa9.12□□□□□ -0.95
CCDC7-209ENST00000539197 CBX2Q14781 532 aaPredicted RBP9.12□□□□□ -0.95
CCDC7-209ENST00000539197 FBXW10Q5XX13 1052 aa9.12□□□□□ -0.95
CCDC7-209ENST00000539197 FAM129CQ86XR2 697 aa9.12□□□□□ -0.95
CCDC7-209ENST00000539197 FEZF2Q8TBJ5 459 aa9.12□□□□□ -0.95
CCDC7-209ENST00000539197 FERD3LQ96RJ6 166 aa9.12□□□□□ -0.95
CCDC7-209ENST00000539197 PCDHA5Q9Y5H7 936 aa9.12□□□□□ -0.95
CCDC7-209ENST00000539197 OTOL1A6NHN0 477 aaPredicted RBP9.11□□□□□ -0.95
CCDC7-209ENST00000539197 HLA-DQA1Q5Y7H0 255 aa9.11□□□□□ -0.95
CCDC7-209ENST00000539197 UNC5AQ6ZN44 842 aa9.11□□□□□ -0.95
CCDC7-209ENST00000539197 SYT8Q8NBV8 401 aa9.11□□□□□ -0.95
CCDC7-209ENST00000539197 SMARCC1Q92922 1105 aaPredicted RBP9.11□□□□□ -0.95
CCDC7-209ENST00000539197 GP6Q9HCN6 339 aa9.11□□□□□ -0.95
CCDC7-209ENST00000539197 RTEL1Q9NZ71 1219 aa9.11□□□□□ -0.95
CCDC7-209ENST00000539197 ZNF451Q9Y4E5 1061 aa9.11□□□□□ -0.95
CCDC7-209ENST00000539197 SYN1P17600 705 aa9.1□□□□□ -0.95
CCDC7-209ENST00000539197 RACK1P63244 317 aaKnown RBP9.1□□□□□ -0.95
CCDC7-209ENST00000539197 PLEKHN1Q494U1 663 aaPredicted RBP9.1□□□□□ -0.95
CCDC7-209ENST00000539197 JAMLQ86YT9 394 aa9.1□□□□□ -0.95
CCDC7-209ENST00000539197 TAB3Q8N5C8 712 aaPredicted RBP9.1□□□□□ -0.95
CCDC7-209ENST00000539197 NR1I3Q14994 352 aa9.09□□□□□ -0.95
CCDC7-209ENST00000539197 NOL9Q5SY16 702 aaKnown RBP9.09□□□□□ -0.95
CCDC7-209ENST00000539197 SP8Q8IXZ3 490 aa9.09□□□□□ -0.95
CCDC7-209ENST00000539197 ZDHHC14Q8IZN3 488 aa9.09□□□□□ -0.95
CCDC7-209ENST00000539197 FIBCD1Q8N539 461 aa9.09□□□□□ -0.95
CCDC7-209ENST00000539197 FCRL3Q96P31 734 aaPredicted RBP9.09□□□□□ -0.95
CCDC7-209ENST00000539197 TM9SF2Q99805 663 aa9.09□□□□□ -0.95
CCDC7-209ENST00000539197 BUB1BO60566 1050 aaPredicted RBP9.08□□□□□ -0.96
CCDC7-209ENST00000539197 IFNGR1P15260 489 aa9.08□□□□□ -0.96
CCDC7-209ENST00000539197 CD247P20963 164 aa9.08□□□□□ -0.96
CCDC7-209ENST00000539197 ZNF200P98182 395 aaPredicted RBP9.08□□□□□ -0.96
CCDC7-209ENST00000539197 ANKRD39Q53RE8 183 aa9.08□□□□□ -0.96
CCDC7-209ENST00000539197 CCDC81Q6ZN84 652 aa9.08□□□□□ -0.96
CCDC7-209ENST00000539197 PWWP2AQ96N64 755 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms