RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 KLF10Q13118 480 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 TBC1D10BQ4KMP7 808 aaPredicted RBP3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 TMEM201Q5SNT2 666 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 KISS1RQ969F8 398 aaPredicted RBP3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 EAF1Q96JC9 268 aaPredicted RBP3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 ING1Q9UK53 422 aaPredicted RBP3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 USTQ9Y2C2 406 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 TLR6Q9Y2C9 796 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 HS3ST3A1Q9Y663 406 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 A0A1W2PQ45 241 aaPredicted RBP3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 A0A1W2PQY0 241 aa3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 SOWAHDA6NJG2 315 aa3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 DNAJA2O60884 412 aa3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 BPNT1O95861 308 aa3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 PLATP00750 562 aa3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 SARSP49591 514 aaKnown RBP3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 CEBPAP49715 358 aaPredicted RBP3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 RNF4P78317 190 aa3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 ATP2B2Q01814 1243 aa3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 BNC2Q6ZN30 1099 aaPredicted RBP3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 ZNF747Q9BV97 191 aa3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 PCED1AQ9H1Q7 454 aa3.77□□□□□ -1.81
CBX3P4-201ENST00000538909 ZNF536O15090 1300 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 A0A1W2PQJ5 194 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 AMHP03971 560 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 PRR5P85299 388 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 MVKQ03426 396 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 FMR1Q06787 632 aaKnown RBP eCLIP3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 CDSNQ15517 529 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 NBPF9Q3BBW0 867 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 BICRALQ6AI39 1079 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 LIMS2Q7Z4I7 341 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 ZNF761Q86XN6 746 aaPredicted RBP3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 BCAS3Q9H6U6 928 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 AP5S1Q9NUS5 200 aa3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 DBR1Q9UK59 544 aaKnown RBP3.76□□□□□ -1.81
CBX3P4-201ENST00000538909 F6X3S4 739 aa3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 F8W031 263 aaPredicted RBP3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 ASGR2P07307 311 aa3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 DBHP09172 617 aa3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 EIF4BP23588 611 aaKnown RBP3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 TACR1P25103 407 aa3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 DIEXFQ68CQ4 756 aaKnown RBP3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 PAQR3Q6TCH7 311 aa3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 ZNF512BQ96KM6 892 aaPredicted RBP3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 NOX5Q96PH1 765 aa3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 CHST7Q9NS84 486 aa3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 NTMQ9P121 344 aa3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 TSC22D4Q9Y3Q8 395 aa3.75□□□□□ -1.81
CBX3P4-201ENST00000538909 SIGLEC6O43699 453 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 UBOX5O94941 541 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 HTR3BO95264 441 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 CYBBP04839 570 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 NCAM1P13591 858 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 GLB1LQ6UWU2 654 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 PALM2Q8IXS6 379 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 NAT16Q8N8M0 369 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 TMEM52Q8NDY8 209 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 ADAMTS17Q8TE56 1095 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 ALG3Q92685 438 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 RNF38Q9H0F5 515 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 INVSQ9Y283 1065 aa3.74□□□□□ -1.81
CBX3P4-201ENST00000538909 RGS13O14921 159 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 ZNF205O95201 554 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 ARSHQ5FYA8 562 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 NBPF12Q5TAG4 269 aaPredicted RBP3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 CRTC3Q6UUV7 619 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 B3GNT8Q7Z7M8 397 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 JAMLQ86YT9 394 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 SMARCC2Q8TAQ2 1214 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 ZBTB8AQ96BR9 441 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 RXFP1Q9HBX9 757 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 SPATA6Q9NWH7 488 aaPredicted RBP3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 GFOD1Q9NXC2 390 aa3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 POLR3KQ9Y2Y1 108 aaPredicted RBP3.73□□□□□ -1.81
CBX3P4-201ENST00000538909 SRGAP3O43295 1099 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 F13A1P00488 732 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 RAG1P15918 1043 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 ENDOUP21128 410 aaKnown RBP3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 PMLP29590 882 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 POLR2BP30876 1174 aaKnown RBP3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 CTSKP43235 329 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 SMAD4Q13485 552 aaKnown RBP3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 ICAM4Q14773 271 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 RGL3Q3MIN7 710 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 MEI1Q5TIA1 1274 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 TTLL7Q6ZT98 887 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 PHC3Q8NDX5 983 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 SSBP3Q9BWW4 388 aaPredicted RBP3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 ANTXR1Q9H6X2 564 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 C11orf21Q9P2W6 132 aa3.72□□□□□ -1.81
CBX3P4-201ENST00000538909 FAM221AA4D161 298 aa3.71□□□□□ -1.82
CBX3P4-201ENST00000538909 LDHBP07195 334 aaKnown RBP3.71□□□□□ -1.82
CBX3P4-201ENST00000538909 VAV1P15498 845 aa3.71□□□□□ -1.82
CBX3P4-201ENST00000538909 BMP8BP34820 402 aa3.71□□□□□ -1.82
CBX3P4-201ENST00000538909 AEBP1Q8IUX7 1158 aa3.71□□□□□ -1.82
CBX3P4-201ENST00000538909 LGI4Q8N135 537 aa3.71□□□□□ -1.82
CBX3P4-201ENST00000538909 KLC2Q9H0B6 622 aa3.71□□□□□ -1.82
CBX3P4-201ENST00000538909 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.71□□□□□ -1.82
CBX3P4-201ENST00000538909 FBXL21Q9UKT6 434 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms