RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 RHOXF2Q9BQY4 288 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 NYXQ9GZU5 481 aa13.46□□□□□ -0.25
CPNE8-203ENST00000538596 TTF2Q9UNY4 1162 aaKnown RBP13.46□□□□□ -0.25
CPNE8-203ENST00000538596 PDS5AQ29RF7 1337 aaKnown RBP13.46□□□□□ -0.26
CPNE8-203ENST00000538596 HSPA1LP34931 641 aa13.46□□□□□ -0.26
CPNE8-203ENST00000538596 KLK7P49862 253 aa13.46□□□□□ -0.26
CPNE8-203ENST00000538596 ST5P78524 1137 aa13.46□□□□□ -0.26
CPNE8-203ENST00000538596 SPAG1Q07617 926 aa13.46□□□□□ -0.26
CPNE8-203ENST00000538596 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.26
CPNE8-203ENST00000538596 TPTE2Q6XPS3 522 aa13.46□□□□□ -0.26
CPNE8-203ENST00000538596 UBXN6Q9BZV1 441 aa13.46□□□□□ -0.26
CPNE8-203ENST00000538596 GUCA1BQ9UMX6 200 aa13.46□□□□□ -0.26
CPNE8-203ENST00000538596 BARGINQ6ZT62 677 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 ZNF444Q8N0Y2 327 aaPredicted RBP13.45□□□□□ -0.26
CPNE8-203ENST00000538596 CERKQ8TCT0 537 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 HPS3Q969F9 1004 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 TRIM47Q96LD4 638 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 PYM1Q9BRP8 204 aaKnown RBP13.45□□□□□ -0.26
CPNE8-203ENST00000538596 SH3GLB2Q9NR46 395 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 B4DLN1 442 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 H7C1D1 291 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 ENC1O14682 589 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 LETM2Q2VYF4 491 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 NCAPH2Q6IBW4 605 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 MB21D1Q8N884 522 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 BARHL2Q9NY43 387 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 USP21Q9UK80 565 aa13.45□□□□□ -0.26
CPNE8-203ENST00000538596 CNTNAP4Q9C0A0 1308 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 PLCG1P19174 1290 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 TXNRD1Q16881 649 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 USP17L2Q6R6M4 530 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 NAPGQ99747 312 aaPredicted RBP13.44□□□□□ -0.26
CPNE8-203ENST00000538596 HDAC6Q9UBN7 1215 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 EPN1Q9Y6I3 576 aaPredicted RBP13.44□□□□□ -0.26
CPNE8-203ENST00000538596 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 H3BQF6 201 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 NDUFA10O95299 355 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 RASA1P20936 1047 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 SPTY2D1Q68D10 685 aaPredicted RBP13.44□□□□□ -0.26
CPNE8-203ENST00000538596 WDR59Q6PJI9 974 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 NOA1Q8NC60 698 aaKnown RBP13.44□□□□□ -0.26
CPNE8-203ENST00000538596 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
CPNE8-203ENST00000538596 AGPAT5Q9NUQ2 364 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 KBTBD4Q9NVX7 518 aa13.44□□□□□ -0.26
CPNE8-203ENST00000538596 PALM3A6NDB9 673 aaPredicted RBP13.43□□□□□ -0.26
CPNE8-203ENST00000538596 LGALS16A8MUM7 142 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 CCNT1O60563 726 aaKnown RBP13.43□□□□□ -0.26
CPNE8-203ENST00000538596 RPS6KA4O75676 772 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 FCER1AP12319 257 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 CYP2C19P33261 490 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 MEX3CQ5U5Q3 659 aaKnown RBP13.43□□□□□ -0.26
CPNE8-203ENST00000538596 CEP112Q8N8E3 955 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 NEK11Q8NG66 645 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 ZNF507Q8TCN5 953 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 ANKS1AQ92625 1134 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 FLT1P17948 1338 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 CCDC151A5D8V7 595 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 NAPAP54920 295 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 STK4Q13043 487 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 MCM6Q14566 821 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 CCDC178Q5BJE1 867 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 TTI2Q6NXR4 508 aa13.43□□□□□ -0.26
CPNE8-203ENST00000538596 GIMAP8Q8ND71 665 aaPredicted RBP13.43□□□□□ -0.26
CPNE8-203ENST00000538596 DUSP9Q99956 384 aaKnown RBP13.43□□□□□ -0.26
CPNE8-203ENST00000538596 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.43□□□□□ -0.26
CPNE8-203ENST00000538596 ATP8B1O43520 1251 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 RHOBTB3O94955 611 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 TECP42680 631 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 CABP7Q86V35 215 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 OR8K1Q8NGG5 319 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
CPNE8-203ENST00000538596 LUC7L2Q9Y383 392 aaKnown RBP13.42□□□□□ -0.26
CPNE8-203ENST00000538596 RASSF10A6NK89 507 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 GNAQP50148 359 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 HERVK_113P62684 666 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 VSNL1P62760 191 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 TRIM14Q14142 442 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 BEND6Q5SZJ8 279 aaPredicted RBP13.42□□□□□ -0.26
CPNE8-203ENST00000538596 GPIHBP1Q8IV16 184 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 CSGALNACT2Q8N6G5 542 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 CCDC148Q8NFR7 591 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 CCSER1Q9C0I3 900 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 ABCB6Q9NP58 842 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 TNRC6CQ9HCJ0 1690 aaKnown RBP13.42□□□□□ -0.26
CPNE8-203ENST00000538596 MAST2Q6P0Q8 1798 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 SMCO2A6NFE2 343 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 PSMA7O14818 248 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 SRGAP2O75044 1071 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 AMPD2Q01433 879 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 KCNB1Q14721 858 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 ANKRD40Q6AI12 368 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 WDR66Q8TBY9 1149 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 TUBGCP2Q9BSJ2 902 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 UBA5Q9GZZ9 404 aa13.42□□□□□ -0.26
CPNE8-203ENST00000538596 BAG3O95817 575 aa13.41□□□□□ -0.26
CPNE8-203ENST00000538596 BTDP43251 543 aa13.41□□□□□ -0.26
CPNE8-203ENST00000538596 PDE4DQ08499 809 aa13.41□□□□□ -0.26
CPNE8-203ENST00000538596 BRD3Q15059 726 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms