RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 DPH5Q9H2P9 285 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 BAG5Q9UL15 447 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 SMCO2A6NFE2 343 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 GAS7O60861 476 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 GSTA1P08263 222 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 GSTA2P09210 222 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 HOXB7P09629 217 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 ATF2P15336 505 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 HSP90AA5PQ58FG0 334 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 IP6K1Q92551 441 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 TRIM37O94972 964 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 GARSP41250 739 aaKnown RBP10.88□□□□□ -0.67
COL4A6-208ENST00000538570 PDE6CP51160 858 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 TTC19Q6DKK2 380 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-208ENST00000538570 JADE1Q6IE81 842 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 NSMFQ6X4W1 530 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 PDZD4Q76G19 769 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-208ENST00000538570 TRIM56Q9BRZ2 755 aaKnown RBP10.88□□□□□ -0.67
COL4A6-208ENST00000538570 DESI2Q9BSY9 194 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 HNRNPH2P55795 449 aaKnown RBP10.88□□□□□ -0.67
COL4A6-208ENST00000538570 APBA1Q02410 837 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 ATP8A2Q9NTI2 1148 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 FAM102BQ5T8I3 360 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 NLRX1Q86UT6 975 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 PDZD8Q8NEN9 1154 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 THEGQ9P2T0 379 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 CTTNBP2Q8WZ74 1663 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 TRPM2O94759 1503 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 MYSM1Q5VVJ2 828 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 LRRC8CQ8TDW0 803 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 ZNF277Q9NRM2 450 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-208ENST00000538570 hCG_1642624A0A1W2PR95 340 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 PFDN6O15212 129 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 ATF7P17544 494 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-208ENST00000538570 SERPINB6P35237 376 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 INPP1P49441 399 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 TFAP4Q01664 338 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 IFT88Q13099 833 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 SUCLG2Q96I99 432 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 RUNDC3BQ96NL0 473 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 TM6SF1Q9BZW5 370 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 C19orf44Q9H6X5 657 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 TMEM63CQ9P1W3 806 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 TAF5LO75529 589 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 OATP04181 439 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 ARMC2Q8NEN0 867 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 LRGUKQ96M69 825 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 C1orf112Q9NSG2 853 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 PANK4Q9NVE7 773 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 TOM1O60784 492 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 GCP02774 474 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 ZAP70P43403 619 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 TRIML1Q8N9V2 468 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 TGFBRAP1Q8WUH2 860 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 HAUS4Q9H6D7 363 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 ARPP21Q9UBL0 812 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-208ENST00000538570 FAM170AA1A519 330 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 BRD1O95696 1058 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 MMEL1Q495T6 779 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 CAPN12Q6ZSI9 719 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 MAPKAPK5Q8IW41 473 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 ZNF280CQ8ND82 737 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 SEPT10Q9P0V9 454 aa10.87□□□□□ -0.67
COL4A6-208ENST00000538570 PSDA5PKW4 1024 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 H7C1D1 291 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 SEC31AO94979 1220 aaKnown RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 TNNC2P02585 160 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 PPARAQ07869 468 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 FNBP4Q8N3X1 1017 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 MIS12Q9H081 205 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 ARMCX3Q9UH62 379 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 CAPN9O14815 690 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 LIG4P49917 911 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 ME3Q16798 604 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 ZNF274Q96GC6 653 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 PAIP2BQ9ULR5 123 aaKnown RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 PASKQ96RG2 1323 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 ATP8B1O43520 1251 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 FAM47AQ5JRC9 791 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 NOSTRINQ8IVI9 506 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 LRRC8AQ8IWT6 810 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 ZNF654Q8IZM8 581 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 A0A1W2PP64 1363 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 SPDYE16A6NNV3 312 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 LPXNO60711 386 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 NR1I2O75469 434 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 TTC4O95801 387 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 ITKQ08881 620 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 DYNC1I2Q13409 638 aaKnown RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 SLFN12Q8IYM2 578 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 UBAP1Q9NZ09 502 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 GOLGA8QA0A0J9YX86 632 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 GOLGA8OA6NCC3 632 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 GOLGA8NF8WBI6 632 aa10.86□□□□□ -0.67
COL4A6-208ENST00000538570 SART1O43290 800 aaKnown RBP10.86□□□□□ -0.67
COL4A6-208ENST00000538570 TECP42680 631 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms