RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 A0A0D9SFI3 127 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 IGBP1P78318 339 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 GPKOWQ92917 476 aaPredicted RBP eCLIP18.48■□□□□ 0.55
SCARB1-205ENST00000538291 AMNQ9BXJ7 453 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 XPOTO43592 962 aaKnown RBP18.48■□□□□ 0.55
SCARB1-205ENST00000538291 PALM2Q8IXS6 379 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 OR8K1Q8NGG5 319 aa18.48■□□□□ 0.55
SCARB1-205ENST00000538291 UBE3CQ15386 1083 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 LRRC24Q50LG9 513 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 NOC2LQ9Y3T9 749 aaKnown RBP18.47■□□□□ 0.55
SCARB1-205ENST00000538291 DLATP10515 647 aaKnown RBP18.47■□□□□ 0.55
SCARB1-205ENST00000538291 IFRD2Q12894 506 aaPredicted RBP18.47■□□□□ 0.55
SCARB1-205ENST00000538291 DENND2CQ68D51 928 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 RSPH3Q86UC2 560 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 MED23Q9ULK4 1368 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 PFDN6O15212 129 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 PDE8BO95263 885 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 MORC3Q14149 939 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 FAM196AQ6ZSG2 479 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 NUF2Q9BZD4 464 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 PFKFB2O60825 505 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 USP14P54578 494 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 GRK7Q8WTQ7 553 aa18.47■□□□□ 0.55
SCARB1-205ENST00000538291 ADD1P35611 737 aaKnown RBP18.46■□□□□ 0.55
SCARB1-205ENST00000538291 GPATCH4Q5T3I0 446 aaKnown RBP18.46■□□□□ 0.55
SCARB1-205ENST00000538291 ABI1Q8IZP0 508 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 OSBPP22059 807 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 SUPT20HL1Q3ZLR7 823 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 RAB3IPQ96QF0 476 aaPredicted RBP18.46■□□□□ 0.55
SCARB1-205ENST00000538291 JPH2Q9BR39 696 aaPredicted RBP18.46■□□□□ 0.55
SCARB1-205ENST00000538291 GREM2Q9H772 168 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 FGAP02671 866 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 ITKQ08881 620 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 PPP2R5AQ15172 486 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 CSRNP1Q96S65 589 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 NUB1Q9Y5A7 615 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 ABCA5Q8WWZ7 1642 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 IL6STP40189 918 aaPredicted RBP18.46■□□□□ 0.55
SCARB1-205ENST00000538291 SATB1Q01826 763 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 PPP2R5EQ16537 467 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 TRIM58Q8NG06 486 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 RSRC1Q96IZ7 334 aaKnown RBP18.46■□□□□ 0.55
SCARB1-205ENST00000538291 KRT12Q99456 494 aa18.46■□□□□ 0.55
SCARB1-205ENST00000538291 TLR3O15455 904 aaKnown RBP18.45■□□□□ 0.54
SCARB1-205ENST00000538291 GADD45BO75293 160 aaPredicted RBP18.45■□□□□ 0.54
SCARB1-205ENST00000538291 CCDC127Q96BQ5 260 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 RPGRIP1Q96KN7 1286 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 GTPBP6O43824 516 aaPredicted RBP18.45■□□□□ 0.54
SCARB1-205ENST00000538291 TTC31Q49AM3 519 aaPredicted RBP18.45■□□□□ 0.54
SCARB1-205ENST00000538291 FAM26FQ5R3K3 315 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 ATP6V0A1Q93050 837 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 AP5M1Q9H0R1 490 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCARB1-205ENST00000538291 KIAA1468Q9P260 1216 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 SSH2Q76I76 1423 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 GTF2A1P52655 376 aaPredicted RBP18.45■□□□□ 0.54
SCARB1-205ENST00000538291 ANKRD20A3Q5VUR7 823 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 PPM1KQ8N3J5 372 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 ARHGEF2Q92974 986 aaKnown RBP18.45■□□□□ 0.54
SCARB1-205ENST00000538291 ANKFY1Q9P2R3 1169 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 INSRP06213 1382 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 PHBP35232 272 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 RPS6KA2Q15349 733 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 ZNF772Q68DY9 489 aaPredicted RBP18.45■□□□□ 0.54
SCARB1-205ENST00000538291 RABGAP1Q9Y3P9 1069 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 KRT71Q3SY84 523 aa18.45■□□□□ 0.54
SCARB1-205ENST00000538291 CLRN2A0PK11 232 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 ADAM9Q13443 819 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 TRIML1Q8N9V2 468 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 SLC17A8Q8NDX2 589 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 ASPRV1Q53RT3 343 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 VCXQ9H320 206 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 ADD3Q9UEY8 706 aaKnown RBP18.44■□□□□ 0.54
SCARB1-205ENST00000538291 RNF8O76064 485 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 PHKA1P46020 1223 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 XPO4Q9C0E2 1151 aaKnown RBP18.44■□□□□ 0.54
SCARB1-205ENST00000538291 SAR1BQ9Y6B6 198 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 ABCC4O15439 1325 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 DTNBO60941 627 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 SERPINB2P05120 415 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 LONP1P36776 959 aaKnown RBP18.44■□□□□ 0.54
SCARB1-205ENST00000538291 PPFIA1Q13136 1202 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 POMGNT1Q8WZA1 660 aa18.44■□□□□ 0.54
SCARB1-205ENST00000538291 PTPRTO14522 1441 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 LTKP29376 864 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 CCDC68Q9H2F9 335 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 PSDA5PKW4 1024 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-205ENST00000538291 PTH1RQ03431 593 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 CC2D2BQ6DHV5 1058 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 BBOX1O75936 387 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 RILPQ96NA2 401 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 NEO1Q92859 1461 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 ESYT2A0FGR8 921 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 CASQ2O14958 399 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-205ENST00000538291 HGSO14964 777 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-205ENST00000538291 CYP4A11Q02928 519 aa18.43■□□□□ 0.54
SCARB1-205ENST00000538291 DDX41Q9UJV9 622 aaKnown RBP18.43■□□□□ 0.54
SCARB1-205ENST00000538291 CIAO1O76071 339 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 CMA1P23946 247 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 RXRBP28702 533 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms