RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CCDC14Q49A88 953 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 CNGA4Q8IV77 575 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 LSM14BQ9BX40 385 aaKnown RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 CGNQ9P2M7 1197 aaKnown RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 MTUS1Q9ULD2 1270 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 NCAPD2Q15021 1401 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 PCP11498 1178 aaKnown RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 HOXA13P31271 388 aaPredicted RBP5.94□□□□□ -1.46
LRP6-203ENST00000538239 TFDP1Q14186 410 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 NSMCE1Q8WV22 266 aa5.94□□□□□ -1.46
LRP6-203ENST00000538239 ARPP19P56211 112 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 NFIXQ14938 502 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 FAM178BQ8IXR5 827 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 RETREG2Q8NC44 543 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 MRRFQ96E11 262 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 BAG1Q99933 345 aaPredicted RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 SRRTQ9BXP5 876 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 RABGAP1Q9Y3P9 1069 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 ARMCX5Q6P1M9 558 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 OTUD5Q96G74 571 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 CLSTN2Q9H4D0 955 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 PPANQ9NQ55 473 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 KCNG1Q9UIX4 513 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 ZSCAN20P17040 1043 aaPredicted RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 PIK3CAP42336 1068 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 SCRN1Q12765 414 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 EZH2Q15910 746 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 CDC37Q16543 378 aaPredicted RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 SELENOSQ9BQE4 189 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 CTTNBP2NLQ9P2B4 639 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 KIAA1024Q9UPX6 916 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 TRPM1Q7Z4N2 1603 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 SPATA31A1Q5TZJ5 1347 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 E9PCH4 1651 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 BTBD18B2RXH4 712 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 PFKFB2O60825 505 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 GADD45BO75293 160 aaPredicted RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 CYP2D6P10635 497 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 YWHAEP62258 255 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 FAM83BQ5T0W9 1011 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 POMGNT1Q8WZA1 660 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 CLIC6Q96NY7 704 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 CCDC77Q9BR77 488 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 ODF2LQ9ULJ1 636 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 PCDHA4Q9UN74 947 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 UNC13BO14795 1591 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 KDM2BQ8NHM5 1336 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 MYO3BQ8WXR4 1341 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 SYNJ2BP-COX16A0A087WUM0 186 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 TLR3O15455 904 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 STK10O94804 968 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 TMEM191BP0C7N4 346 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 ATP2A2P16615 1042 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 PDIA3P30101 505 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 GALNT17Q6IS24 598 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 CCDC125Q86Z20 511 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 APOBEC3FQ8IUX4 373 aaKnown RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 CD209Q9NNX6 404 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 COX16Q9P0S2 106 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 H7C1W4 665 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 MEIS1O00470 390 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 CAPN9O14815 690 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 FOSP01100 380 aaPredicted RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 MCAMP43121 646 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 NKX1-1Q15270 411 aaPredicted RBP5.93□□□□□ -1.46
LRP6-203ENST00000538239 SCYL2Q6P3W7 929 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 MYOCDQ8IZQ8 938 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 OSBP2Q969R2 916 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 CPDO75976 1380 aa5.93□□□□□ -1.46
LRP6-203ENST00000538239 INO80B-WBP1J3KQ70 363 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 SH3BP5O60239 455 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 EIF2AK2P19525 551 aaKnown RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 MTERF2Q49AM1 385 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 ZBTB33Q86T24 672 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 ZNF710Q8N1W2 664 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 LINC00116Q8NCU8 138 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 CCDC127Q96BQ5 260 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 IWS1Q96ST2 819 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 INO80BQ9C086 356 aaPredicted RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 RAVER2Q9HCJ3 691 aaKnown RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 ZSWIM6Q9HCJ5 1215 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 SLC39A2Q9NP94 309 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 ABCA6Q8N139 1617 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 ERCC5P28715 1186 aaPredicted RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 FANCCQ00597 558 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 CACNB1Q02641 598 aaPredicted RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 FTOQ9C0B1 505 aaKnown RBP eCLIP5.92□□□□□ -1.46
LRP6-203ENST00000538239 ZNF215Q9UL58 517 aaPredicted RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 PRDX5P30044 214 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 PTGDRQ13258 359 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 SLFNL1Q499Z3 407 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 MYSM1Q5VVJ2 828 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 CYP26C1Q6V0L0 522 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 PI4K2BQ8TCG2 481 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 ZFP91Q96JP5 570 aaPredicted RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 LSG1Q9H089 658 aaKnown RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 NLRC4Q9NPP4 1024 aa5.92□□□□□ -1.46
LRP6-203ENST00000538239 FAM207AQ9NSI2 230 aaPredicted RBP5.92□□□□□ -1.46
LRP6-203ENST00000538239 PAXBP1Q9Y5B6 917 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms