RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 TOP1P11387 765 aaKnown RBP17.6■□□□□ 0.41
LRRK1-211ENST00000538064 AKR1A1P14550 325 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 TAL1P17542 331 aaPredicted RBP17.6■□□□□ 0.41
LRRK1-211ENST00000538064 MAGEA10P43363 369 aaPredicted RBP17.6■□□□□ 0.41
LRRK1-211ENST00000538064 LRRC41Q15345 812 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 TKFCQ3LXA3 575 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 AKNAD1Q5T1N1 836 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 ANKRD35Q8N283 1001 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 FGD4Q96M96 766 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 RNF41Q9H4P4 317 aaPredicted RBP17.6■□□□□ 0.41
LRRK1-211ENST00000538064 ACAD9Q9H845 621 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 XPNPEP3Q9NQH7 507 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 LAMA3Q16787 3333 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 NEDD4P46934 1319 aa17.59■□□□□ 0.41
LRRK1-211ENST00000538064 NT5C2P49902 561 aa17.59■□□□□ 0.41
LRRK1-211ENST00000538064 ATN1P54259 1190 aaPredicted RBP17.59■□□□□ 0.41
LRRK1-211ENST00000538064 SNX17Q15036 470 aa17.59■□□□□ 0.41
LRRK1-211ENST00000538064 CCDC96Q2M329 555 aa17.59■□□□□ 0.41
LRRK1-211ENST00000538064 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
LRRK1-211ENST00000538064 CHMP4CQ96CF2 233 aa17.59■□□□□ 0.41
LRRK1-211ENST00000538064 TMEM47Q9BQJ4 181 aa17.59■□□□□ 0.41
LRRK1-211ENST00000538064 HOMER2Q9NSB8 354 aa17.59■□□□□ 0.41
LRRK1-211ENST00000538064 RNF146Q9NTX7 359 aa17.59■□□□□ 0.41
LRRK1-211ENST00000538064 PRR12Q9ULL5 1215 aa17.59■□□□□ 0.41
LRRK1-211ENST00000538064 SNAI1O95863 264 aaPredicted RBP17.58■□□□□ 0.4
LRRK1-211ENST00000538064 RTP1P59025 263 aa17.58■□□□□ 0.4
LRRK1-211ENST00000538064 MFSD6Q6ZSS7 791 aa17.58■□□□□ 0.4
LRRK1-211ENST00000538064 AGBL1Q96MI9 1066 aa17.58■□□□□ 0.4
LRRK1-211ENST00000538064 PHF24Q9UPV7 400 aa17.58■□□□□ 0.4
LRRK1-211ENST00000538064 MYH6P13533 1939 aa17.57■□□□□ 0.4
LRRK1-211ENST00000538064 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
LRRK1-211ENST00000538064 PDE4AP27815 886 aa17.57■□□□□ 0.4
LRRK1-211ENST00000538064 CCDC174Q6PII3 467 aa17.57■□□□□ 0.4
LRRK1-211ENST00000538064 BTNL9Q6UXG8 535 aa17.57■□□□□ 0.4
LRRK1-211ENST00000538064 RNF180Q86T96 592 aa17.57■□□□□ 0.4
LRRK1-211ENST00000538064 LENG1Q96BZ8 264 aaPredicted RBP17.57■□□□□ 0.4
LRRK1-211ENST00000538064 DSCC1Q9BVC3 393 aa17.57■□□□□ 0.4
LRRK1-211ENST00000538064 RANBP17Q9H2T7 1088 aaKnown RBP17.57■□□□□ 0.4
LRRK1-211ENST00000538064 A1CFQ9NQ94 594 aaKnown RBP17.57■□□□□ 0.4
LRRK1-211ENST00000538064 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.57■□□□□ 0.4
LRRK1-211ENST00000538064 ZHX1Q9UKY1 873 aaPredicted RBP17.57■□□□□ 0.4
LRRK1-211ENST00000538064 MTMR7Q9Y216 660 aa17.57■□□□□ 0.4
LRRK1-211ENST00000538064 SYNRGQ9UMZ2 1314 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 POTEB2H3BUK9 544 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 ZNF213O14771 459 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 ADAMTS4O75173 837 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 PDHBP11177 359 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 C1orf53Q5VUE5 145 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 SLC39A5Q6ZMH5 540 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 ARMCX2Q7L311 632 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 FAM133AQ8N9E0 248 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 ESR2Q92731 530 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 TTC14Q96N46 770 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 TRERF1Q96PN7 1200 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 FAM184BQ9ULE4 1060 aa17.56■□□□□ 0.4
LRRK1-211ENST00000538064 PGK1P00558 417 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 ICAM1P05362 532 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 SNHG28P0DPA3 235 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 ALAS1P13196 640 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 GSPT1P15170 499 aaKnown RBP17.55■□□□□ 0.4
LRRK1-211ENST00000538064 ADCYAP1R1P41586 468 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 SNAP25P60880 206 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 ACVR2BQ13705 512 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 TTC22Q5TAA0 569 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 SYDE2Q5VT97 1194 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 TDHQ8IZJ6 230 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 ABHD16BQ9H3Z7 469 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 CCPG1Q9ULG6 757 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 ATP11BQ9Y2G3 1177 aa17.55■□□□□ 0.4
LRRK1-211ENST00000538064 FRMPD2Q68DX3 1309 aaPredicted RBP17.54■□□□□ 0.4
LRRK1-211ENST00000538064 RAD50Q92878 1312 aa17.54■□□□□ 0.4
LRRK1-211ENST00000538064 SOX1O00570 391 aaPredicted RBP17.54■□□□□ 0.4
LRRK1-211ENST00000538064 CNTN2Q02246 1040 aa17.54■□□□□ 0.4
LRRK1-211ENST00000538064 TRIM60Q495X7 471 aa17.54■□□□□ 0.4
LRRK1-211ENST00000538064 TTBK2Q6IQ55 1244 aa17.54■□□□□ 0.4
LRRK1-211ENST00000538064 CCDC144CPQ8IYA2 1237 aa17.54■□□□□ 0.4
LRRK1-211ENST00000538064 FERMT2Q96AC1 680 aa17.54■□□□□ 0.4
LRRK1-211ENST00000538064 UBE2OQ9C0C9 1292 aaKnown RBP17.54■□□□□ 0.4
LRRK1-211ENST00000538064 KATNBL1Q9H079 304 aa17.54■□□□□ 0.4
LRRK1-211ENST00000538064 PRKAG2Q9UGJ0 569 aa17.54■□□□□ 0.4
LRRK1-211ENST00000538064 A0A1W2PQ45 241 aaPredicted RBP17.53■□□□□ 0.4
LRRK1-211ENST00000538064 A0A1W2PQY0 241 aa17.53■□□□□ 0.4
LRRK1-211ENST00000538064 DUSP11O75319 330 aaKnown RBP17.53■□□□□ 0.4
LRRK1-211ENST00000538064 CST5P28325 142 aaPredicted RBP17.53■□□□□ 0.4
LRRK1-211ENST00000538064 SLC16A2P36021 539 aa17.53■□□□□ 0.4
LRRK1-211ENST00000538064 MDM2Q00987 491 aaPredicted RBP17.53■□□□□ 0.4
LRRK1-211ENST00000538064 ZNF543Q08ER8 600 aa17.53■□□□□ 0.4
LRRK1-211ENST00000538064 MUM1L1Q5H9M0 696 aa17.53■□□□□ 0.4
LRRK1-211ENST00000538064 DGKHQ86XP1 1220 aa17.53■□□□□ 0.4
LRRK1-211ENST00000538064 KLHDC9Q8NEP7 349 aa17.53■□□□□ 0.4
LRRK1-211ENST00000538064 TSEN34Q9BSV6 310 aaKnown RBP17.53■□□□□ 0.4
LRRK1-211ENST00000538064 GPCPD1Q9NPB8 672 aa17.53■□□□□ 0.4
LRRK1-211ENST00000538064 CYP39A1Q9NYL5 469 aa17.53■□□□□ 0.4
LRRK1-211ENST00000538064 ASTN1O14525 1302 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 SOWAHBA6NEL2 793 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 ADCY6O43306 1168 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 KDM4AO75164 1064 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 IMMTQ16891 758 aaKnown RBP17.52■□□□□ 0.4
LRRK1-211ENST00000538064 LRIT3Q3SXY7 679 aa17.52■□□□□ 0.4
LRRK1-211ENST00000538064 CCDC178Q5BJE1 867 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms