RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 TRIM43BA6NCK2 446 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 MOXD2PA6NHM9 499 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 NMT2O60551 498 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 PQBP1O60828 265 aaKnown RBP11.46□□□□□ -0.57
CHD4-207ENST00000537634 DUSP11O75319 330 aaKnown RBP11.46□□□□□ -0.57
CHD4-207ENST00000537634 C6orf222P0C671 652 aaPredicted RBP11.46□□□□□ -0.57
CHD4-207ENST00000537634 ACLYP53396 1101 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 ACVR2BQ13705 512 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 CCDC96Q2M329 555 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 VPS53Q5VIR6 699 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 KCTD1Q719H9 257 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 ARMCX2Q7L311 632 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 TRIM43Q96BQ3 446 aaPredicted RBP11.46□□□□□ -0.57
CHD4-207ENST00000537634 STARD7Q9NQZ5 370 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 IL17RBQ9NRM6 502 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 TOMM22Q9NS69 142 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 RNF146Q9NTX7 359 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 MTMR10Q9NXD2 777 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 ANAPC4Q9UJX5 808 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 MTMR7Q9Y216 660 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 STXBP5LQ9Y2K9 1186 aa11.46□□□□□ -0.57
CHD4-207ENST00000537634 DCDC2CA8MYV0 355 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 ORC4O43929 436 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 PLA2G6O60733 806 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 ALAS1P13196 640 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 RAG1P15918 1043 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 CST5P28325 142 aaPredicted RBP11.45□□□□□ -0.58
CHD4-207ENST00000537634 CNTN2Q02246 1040 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 SHHQ15465 462 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 ALX1Q15699 326 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 KCNA10Q16322 511 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 TKFCQ3LXA3 575 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 CCDC144BQ3MJ40 725 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 FAM109BQ6ICB4 259 aaPredicted RBP11.45□□□□□ -0.58
CHD4-207ENST00000537634 RCSD1Q6JBY9 416 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 CCDC174Q6PII3 467 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 PCSK9Q8NBP7 692 aaKnown RBP11.45□□□□□ -0.58
CHD4-207ENST00000537634 KLHDC9Q8NEP7 349 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 FGD4Q96M96 766 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 AGBL1Q96MI9 1066 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 A1CFQ9NQ94 594 aaKnown RBP11.45□□□□□ -0.58
CHD4-207ENST00000537634 INCENPQ9NQS7 918 aa11.45□□□□□ -0.58
CHD4-207ENST00000537634 LRRC37A2A6NM11 1700 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 ZNF536O15090 1300 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 MROH7Q68CQ1 1323 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 A0A0D9SFI3 127 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 MYADML2A6NDP7 307 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 TRIM6-TRIM34B2RNG4 842 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 KIAA0355O15063 1070 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 AAMPQ13685 434 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 MCMDC2Q4G0Z9 681 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 RRP12Q5JTH9 1297 aaKnown RBP11.44□□□□□ -0.58
CHD4-207ENST00000537634 C9orf50Q5SZB4 431 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 ZNF697Q5TEC3 545 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 RASGRP2Q7LDG7 609 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 TICAM2Q86XR7 235 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 FAM133AQ8N9E0 248 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 DCAF4Q8WV16 495 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 FAM227BQ96M60 508 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 GLT1D1Q96MS3 346 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 TRERF1Q96PN7 1200 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 LNPKQ9C0E8 428 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 TMEM39AQ9NV64 488 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 CCPG1Q9ULG6 757 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
CHD4-207ENST00000537634 ZMYM6O95789 1325 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 CCDC171Q6TFL3 1326 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 ASB14A6NK59 587 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 ADCY6O43306 1168 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 FGAP02671 866 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 GJA9P57773 515 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 SNAP25P60880 206 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 FPGSQ05932 587 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 NMIQ13287 307 aaPredicted RBP11.43□□□□□ -0.58
CHD4-207ENST00000537634 GNASQ5JWF2 1037 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 CCSAPQ6IQ19 270 aaPredicted RBP11.43□□□□□ -0.58
CHD4-207ENST00000537634 NOL8Q76FK4 1167 aaKnown RBP11.43□□□□□ -0.58
CHD4-207ENST00000537634 ANKRD33Q7Z3H0 272 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 RILPL2Q969X0 211 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 VTI1AQ96AJ9 217 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 FAM161BQ96MY7 647 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 TOX2Q96NM4 488 aa11.43□□□□□ -0.58
CHD4-207ENST00000537634 UPF3AQ9H1J1 476 aaKnown RBP11.43□□□□□ -0.58
CHD4-207ENST00000537634 ELP1O95163 1332 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 A0A0U1RQG5 324 aaPredicted RBP11.42□□□□□ -0.58
CHD4-207ENST00000537634 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 ASGR1P07306 291 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 FGRP09769 529 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 HSPD1P10809 573 aaKnown RBP11.42□□□□□ -0.58
CHD4-207ENST00000537634 TOP1P11387 765 aaKnown RBP11.42□□□□□ -0.58
CHD4-207ENST00000537634 ITGB8P26012 769 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 NOVP48745 357 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 MFAP1P55081 439 aaKnown RBP11.42□□□□□ -0.58
CHD4-207ENST00000537634 TNFAIP2Q03169 654 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 FAAP100Q0VG06 881 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 NSMFQ6X4W1 530 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 ZNF589Q86UQ0 364 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms