RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PNMA6FA0A0J9YX94 578 aa28.06■■■□□ 2.08
HMGA2-208ENST00000537429 ZBED4O75132 1171 aa28.06■■■□□ 2.08
HMGA2-208ENST00000537429 HMGN5P82970 282 aaKnown RBP28.06■■■□□ 2.08
HMGA2-208ENST00000537429 AKAP17AQ02040 695 aaKnown RBP28.06■■■□□ 2.08
HMGA2-208ENST00000537429 PKN1Q16512 942 aa28.06■■■□□ 2.08
HMGA2-208ENST00000537429 QRICH1Q2TAL8 776 aa28.06■■■□□ 2.08
HMGA2-208ENST00000537429 SMCR8Q8TEV9 937 aaPredicted RBP28.06■■■□□ 2.08
HMGA2-208ENST00000537429 DDX11Q96FC9 970 aa28.06■■■□□ 2.08
HMGA2-208ENST00000537429 ORC3Q9UBD5 711 aaPredicted RBP28.06■■■□□ 2.08
HMGA2-208ENST00000537429 CTDP1Q9Y5B0 961 aaPredicted RBP28.06■■■□□ 2.08
HMGA2-208ENST00000537429 DEXIO95424 95 aa28.05■■■□□ 2.08
HMGA2-208ENST00000537429 MB21D1Q8N884 522 aa28.05■■■□□ 2.08
HMGA2-208ENST00000537429 SEC63Q9UGP8 760 aaKnown RBP28.05■■■□□ 2.08
HMGA2-208ENST00000537429 ZNF536O15090 1300 aa28.05■■■□□ 2.08
HMGA2-208ENST00000537429 COL11A1P12107 1806 aaPredicted RBP28.04■■■□□ 2.08
HMGA2-208ENST00000537429 MYH6P13533 1939 aa28.04■■■□□ 2.08
HMGA2-208ENST00000537429 TAF1CQ15572 869 aaPredicted RBP28.04■■■□□ 2.08
HMGA2-208ENST00000537429 GTF3C2Q8WUA4 911 aaPredicted RBP28.04■■■□□ 2.08
HMGA2-208ENST00000537429 SMC3Q9UQE7 1217 aa28.04■■■□□ 2.08
HMGA2-208ENST00000537429 PPP1R11O60927 126 aaPredicted RBP28.03■■■□□ 2.08
HMGA2-208ENST00000537429 ALDH1A1P00352 501 aa28.03■■■□□ 2.08
HMGA2-208ENST00000537429 HSP90AA1P07900 732 aaKnown RBP28.03■■■□□ 2.08
HMGA2-208ENST00000537429 TMEM132BQ14DG7 1078 aa28.03■■■□□ 2.08
HMGA2-208ENST00000537429 PFKFB3Q16875 520 aaPredicted RBP28.03■■■□□ 2.08
HMGA2-208ENST00000537429 RBPJLQ9UBG7 517 aa28.03■■■□□ 2.08
HMGA2-208ENST00000537429 ZNF214Q9UL59 606 aaPredicted RBP28.03■■■□□ 2.08
HMGA2-208ENST00000537429 ATP2A1O14983 1001 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 SLC4A3P48751 1232 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 OAZ1P54368 228 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 CCDC174Q6PII3 467 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 FOXD4L1Q9NU39 408 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 BTBD7Q9P203 1132 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 RABGAP1Q9Y3P9 1069 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 ICAM1P05362 532 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 SCG2P13521 617 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 GJB2P29033 226 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 GCLCP48506 637 aaPredicted RBP28.02■■■□□ 2.08
HMGA2-208ENST00000537429 CPXCR1Q8N123 301 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 RAVER2Q9HCJ3 691 aaKnown RBP28.02■■■□□ 2.08
HMGA2-208ENST00000537429 TXNRD2Q9NNW7 524 aa28.02■■■□□ 2.08
HMGA2-208ENST00000537429 CA12O43570 354 aa28.01■■■□□ 2.07
HMGA2-208ENST00000537429 CNMDO75829 334 aa28.01■■■□□ 2.07
HMGA2-208ENST00000537429 FBXO11Q86XK2 927 aa28.01■■■□□ 2.07
HMGA2-208ENST00000537429 AMNQ9BXJ7 453 aa28.01■■■□□ 2.07
HMGA2-208ENST00000537429 ZFYVE28Q9HCC9 887 aa28.01■■■□□ 2.07
HMGA2-208ENST00000537429 ADGRA2Q96PE1 1338 aa28.01■■■□□ 2.07
HMGA2-208ENST00000537429 PCNTO95613 3336 aa28■■■□□ 2.07
HMGA2-208ENST00000537429 SPRYD3Q8NCJ5 442 aa28■■■□□ 2.07
HMGA2-208ENST00000537429 WASF1Q92558 559 aa28■■■□□ 2.07
HMGA2-208ENST00000537429 AGBL1Q96MI9 1066 aa28■■■□□ 2.07
HMGA2-208ENST00000537429 AIFM3Q96NN9 605 aa28■■■□□ 2.07
HMGA2-208ENST00000537429 PAGR1Q9BTK6 254 aa28■■■□□ 2.07
HMGA2-208ENST00000537429 PEX10O60683 326 aa27.99■■■□□ 2.07
HMGA2-208ENST00000537429 WWC2Q6AWC2 1192 aa27.99■■■□□ 2.07
HMGA2-208ENST00000537429 DNAJC5GQ8N7S2 189 aa27.99■■■□□ 2.07
HMGA2-208ENST00000537429 FAM184AQ8NB25 1140 aa27.99■■■□□ 2.07
HMGA2-208ENST00000537429 PNMA2Q9UL42 364 aa27.99■■■□□ 2.07
HMGA2-208ENST00000537429 TLR2O60603 784 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 CRHR2Q13324 411 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 HEATR3Q7Z4Q2 680 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 GPKOWQ92917 476 aaPredicted RBP eCLIP27.98■■■□□ 2.07
HMGA2-208ENST00000537429 COA7Q96BR5 231 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 ALG1Q9BT22 464 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 TEX13BQ9BXU2 312 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 BARHL2Q9NY43 387 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 MORF4L1Q9UBU8 362 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 CCPG1Q9ULG6 757 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 CEP350Q5VT06 3117 aa27.98■■■□□ 2.07
HMGA2-208ENST00000537429 hCG_1984214I3L0E3 225 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 STAT3P40763 770 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 TRAF1Q13077 416 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 PLS1Q14651 629 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 Q3C1V9 767 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 ANKRD13CQ8N6S4 541 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 ZNF713Q8N859 430 aaPredicted RBP27.97■■■□□ 2.07
HMGA2-208ENST00000537429 SPATC1LQ9H0A9 340 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 PCDHA1Q9Y5I3 950 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 ERVK-9P63128 1117 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 ERVK-24P63145 666 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 USH1GQ495M9 461 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 SNRNP48Q6IEG0 339 aaKnown RBP27.97■■■□□ 2.07
HMGA2-208ENST00000537429 KIF3AQ9Y496 699 aa27.97■■■□□ 2.07
HMGA2-208ENST00000537429 SMCHD1A6NHR9 2005 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 STXBP3O00186 592 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 TRPA1O75762 1119 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 BCRP11274 1271 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 TAL1P17542 331 aaPredicted RBP27.96■■■□□ 2.07
HMGA2-208ENST00000537429 MAP2K1Q02750 393 aaPredicted RBP27.96■■■□□ 2.07
HMGA2-208ENST00000537429 TYW1BQ6NUM6 668 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 C17orf99Q6UX52 265 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 RIOX2Q8IUF8 465 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 SHISA4Q96DD7 197 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 CFHR5Q9BXR6 569 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 RNF186Q9NXI6 227 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 RIPK3Q9Y572 518 aa27.96■■■□□ 2.07
HMGA2-208ENST00000537429 FAM110CQ1W6H9 321 aa27.95■■■□□ 2.06
HMGA2-208ENST00000537429 GPRC5AQ8NFJ5 357 aa27.95■■■□□ 2.06
HMGA2-208ENST00000537429 IPO9Q96P70 1041 aaKnown RBP27.95■■■□□ 2.06
HMGA2-208ENST00000537429 BEGAINQ9BUH8 593 aa27.95■■■□□ 2.06
HMGA2-208ENST00000537429 SH3GLB2Q9NR46 395 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms