RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 ZAP70P43403 619 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 IRX1P78414 480 aaPredicted RBP12.05□□□□□ -0.48
LMO3-215ENST00000537304 KCNB1Q14721 858 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 TTMPQ5BVD1 217 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 NLRP14Q86W24 1093 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 CREG2Q8IUH2 290 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 N4BP2L2Q92802 583 aaPredicted RBP12.05□□□□□ -0.48
LMO3-215ENST00000537304 CCDC114Q96M63 670 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 CCDC42Q96M95 316 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 NACAP1Q9BZK3 213 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 NHEJ1Q9H9Q4 299 aaPredicted RBP12.05□□□□□ -0.48
LMO3-215ENST00000537304 ATP6V0A4Q9HBG4 840 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 TRIM10Q9UDY6 481 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 COL18A1P39060 1754 aa12.05□□□□□ -0.48
LMO3-215ENST00000537304 GRID2IPA4D2P6 1211 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 ZMYND10O75800 440 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 RPN1P04843 607 aaKnown RBP12.04□□□□□ -0.48
LMO3-215ENST00000537304 TRIM21P19474 475 aaKnown RBP12.04□□□□□ -0.48
LMO3-215ENST00000537304 RXRAP19793 462 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 SLC8A3P57103 927 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 CFAP221Q4G0U5 840 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 LRRC24Q50LG9 513 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 LRCH2Q5VUJ6 765 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 MFSD6Q6ZSS7 791 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 ARHGAP27Q6ZUM4 889 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 CCDC13Q8IYE1 715 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 RNF10Q8N5U6 811 aaKnown RBP12.04□□□□□ -0.48
LMO3-215ENST00000537304 ZNF507Q8TCN5 953 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 ZNF496Q96IT1 587 aaPredicted RBP12.04□□□□□ -0.48
LMO3-215ENST00000537304 ATP6V1G3Q96LB4 118 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 SEC31BQ9NQW1 1179 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 BATF3Q9NR55 127 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 SLAIN2Q9P270 581 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 KCNJ14Q9UNX9 436 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 AXIN2Q9Y2T1 843 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 TJP1Q07157 1748 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 RGPD5Q99666 1765 aa12.04□□□□□ -0.48
LMO3-215ENST00000537304 PATL2C9JE40 543 aaKnown RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 MYO1FO00160 1098 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 PDE2AO00408 941 aaPredicted RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 TATP17735 454 aaPredicted RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 HNRNPH3P31942 346 aaKnown RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 ZC3H6P61129 1189 aaKnown RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 ATP2C1P98194 919 aaPredicted RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 BIRC3Q13489 604 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 ZKSCAN8Q15776 578 aaPredicted RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 CCDC96Q2M329 555 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 FKBP15Q5T1M5 1219 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 AKNAD1Q5T1N1 836 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 ARL6IP4Q66PJ3 421 aaKnown RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 WDR59Q6PJI9 974 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 TMED8Q6PL24 325 aaPredicted RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 RUFY4Q6ZNE9 571 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 PARP9Q8IXQ6 854 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 GSPT2Q8IYD1 628 aaKnown RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 IQCKQ8N0W5 287 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 COL22A1Q8NFW1 1626 aaPredicted RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 MYCBPAPQ8TBZ2 947 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 SGSM3Q96HU1 749 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 DHTKD1Q96HY7 919 aaPredicted RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 EPSTI1Q96J88 318 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 DCAF5Q96JK2 942 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 GDAP1L1Q96MZ0 367 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 ZIM3Q96PE6 472 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 CCT8L2Q96SF2 557 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 OSBPL9Q96SU4 736 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 LRRC1Q9BTT6 524 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 NAPBQ9H115 298 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 SH2D4AQ9H788 454 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 MAGEF1Q9HAY2 307 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 SLC40A1Q9NP59 571 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 CHD4Q14839 1912 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 PES1O00541 588 aaKnown RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 CALM1P0DP23 149 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 CALM2P0DP24 149 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 CALM3P0DP25 149 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 GHRP10912 638 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 BRD2P25440 801 aaKnown RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 CDC25AP30304 524 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 LONP1P36776 959 aaKnown RBP12.03□□□□□ -0.48
LMO3-215ENST00000537304 TTC38Q5R3I4 469 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 HAUS3Q68CZ6 603 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 USP49Q70CQ1 688 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 ADSSL1Q8N142 457 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 FANCBQ8NB91 859 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 GDF3Q9NR23 364 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 SWAP70Q9UH65 585 aa12.03□□□□□ -0.48
LMO3-215ENST00000537304 XDHP47989 1333 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 A0A087X0B3 334 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 ANKRD18BA2A2Z9 1011 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
LMO3-215ENST00000537304 LCA5LO95447 670 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 PHKG2P15735 406 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 NR5A1Q13285 461 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 SLC39A6Q13433 755 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 LACTB2Q53H82 288 aaPredicted RBP12.02□□□□□ -0.49
LMO3-215ENST00000537304 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
LMO3-215ENST00000537304 PDXDC2PQ6P474 469 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms