RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SLC35G1Q2M3R5 365 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 GIMAP8Q8ND71 665 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 ZMYND12Q9H0C1 365 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 THAP9Q9H5L6 903 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 MAGEF1Q9HAY2 307 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 STX8Q9UNK0 236 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 A0A0U1RQJ8 604 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 KLRC4O43908 158 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 GRAPQ13588 217 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 ZNF804AQ7Z570 1209 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 GRAPLQ8TC17 118 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 ATRIPQ8WXE1 791 aa18.03■□□□□ 0.48
CHMP1A-202ENST00000535997 PSMA7O14818 248 aa18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 TBC1D8O95759 1140 aa18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 RASA1P20936 1047 aa18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 DIXDC1Q155Q3 683 aa18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 KIF4BQ2VIQ3 1234 aa18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 C15orf52Q6ZUT6 534 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 PTF1AQ7RTS3 328 aa18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 MB21D1Q8N884 522 aa18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 OR8K1Q8NGG5 319 aa18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 SPZ1Q9BXG8 430 aa18.02■□□□□ 0.48
CHMP1A-202ENST00000535997 CCDC151A5D8V7 595 aa18.02■□□□□ 0.47
CHMP1A-202ENST00000535997 KLRF2D3W0D1 207 aa18.02■□□□□ 0.47
CHMP1A-202ENST00000535997 BRD3Q15059 726 aa18.02■□□□□ 0.47
CHMP1A-202ENST00000535997 ACRBPQ8NEB7 543 aa18.02■□□□□ 0.47
CHMP1A-202ENST00000535997 NOC3LQ8WTT2 800 aaKnown RBP18.02■□□□□ 0.47
CHMP1A-202ENST00000535997 DHTKD1Q96HY7 919 aaPredicted RBP18.02■□□□□ 0.47
CHMP1A-202ENST00000535997 UBXN6Q9BZV1 441 aa18.02■□□□□ 0.47
CHMP1A-202ENST00000535997 ST7Q9NRC1 585 aa18.02■□□□□ 0.47
CHMP1A-202ENST00000535997 PP2D1A8MPX8 630 aa18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 LGALS16A8MUM7 142 aa18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 SEC31AO94979 1220 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 SMARCA1P28370 1054 aa18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 ZNF507Q8TCN5 953 aa18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 LUC7L2Q9Y383 392 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 EPN1Q9Y6I3 576 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 POTEB2H3BUK9 544 aa18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 GNA11P29992 359 aa18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 VPS72Q15906 364 aa18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 KRT25Q7Z3Z0 450 aa18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 CCNL1Q9UK58 526 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-202ENST00000535997 TRIM49BA6NDI0 452 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 ARHGAP25P42331 645 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 SLC35F6Q8N357 371 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 SLC44A5Q8NCS7 719 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 HNRNPLLQ8WVV9 542 aaKnown RBP18■□□□□ 0.47
CHMP1A-202ENST00000535997 DNAJC7Q99615 494 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 NAPGQ99747 312 aaPredicted RBP18■□□□□ 0.47
CHMP1A-202ENST00000535997 MAGEC2Q9UBF1 373 aaPredicted RBP18■□□□□ 0.47
CHMP1A-202ENST00000535997 CAPN11Q9UMQ6 739 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 TTC26A0AVF1 554 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 DNM2P50570 870 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 PMS1P54277 932 aaKnown RBP18■□□□□ 0.47
CHMP1A-202ENST00000535997 PIP4K2BP78356 416 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 NFIXQ14938 502 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 GRIK5Q16478 980 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 TSR1Q2NL82 804 aaKnown RBP18■□□□□ 0.47
CHMP1A-202ENST00000535997 MAPKAPK5Q8IW41 473 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 NEDD1Q8NHV4 660 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 CCDC47Q96A33 483 aaKnown RBP18■□□□□ 0.47
CHMP1A-202ENST00000535997 C6orf50Q9HD87 102 aa18■□□□□ 0.47
CHMP1A-202ENST00000535997 SASH3O75995 380 aa17.99■□□□□ 0.47
CHMP1A-202ENST00000535997 NDUFA10O95299 355 aa17.99■□□□□ 0.47
CHMP1A-202ENST00000535997 RFC4P35249 363 aa17.99■□□□□ 0.47
CHMP1A-202ENST00000535997 NONOQ15233 471 aaKnown RBP eCLIP17.99■□□□□ 0.47
CHMP1A-202ENST00000535997 TTI2Q6NXR4 508 aa17.99■□□□□ 0.47
CHMP1A-202ENST00000535997 C16orf86Q6ZW13 317 aa17.99■□□□□ 0.47
CHMP1A-202ENST00000535997 SLF1Q9BQI6 1058 aa17.99■□□□□ 0.47
CHMP1A-202ENST00000535997 RTFDC1Q9BY42 306 aaPredicted RBP17.99■□□□□ 0.47
CHMP1A-202ENST00000535997 FUT8Q9BYC5 575 aa17.99■□□□□ 0.47
CHMP1A-202ENST00000535997 GPR75-ASB3A0A0A6YYF3 556 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 SMCO2A6NFE2 343 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 OR52Z1P0C646 297 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 GOLGA8HP0CJ92 632 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 PPP1R2P41236 205 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 CDK8P49336 464 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 NAPAP54920 295 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 WHAMMP3Q1A5X7 153 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 CABP7Q86V35 215 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 TRIM47Q96LD4 638 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 EYA3Q99504 573 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 CHP1Q99653 195 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 ZSWIM4Q9H7M6 989 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 PUF60Q9UHX1 559 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 MTMR7Q9Y216 660 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 BICDL2A1A5D9 508 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 ABL1P00519 1130 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 PLCG2P16885 1265 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 AMPD3Q01432 767 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 ORC2Q13416 577 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 TRAPPC3LQ5T215 181 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 RRP36Q96EU6 259 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 PLIN2Q99541 437 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 C7orf25Q9BPX7 421 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 NUP58Q9BVL2 599 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 SAP30BPQ9UHR5 308 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 RAB21Q9UL25 225 aa17.98■□□□□ 0.47
CHMP1A-202ENST00000535997 CCNT1O60563 726 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms