RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 NECAB2Q7Z6G3 386 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 FANCBQ8NB91 859 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 CTCFLQ8NI51 663 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-205ENST00000535900 DIS3LQ8TF46 1054 aaKnown RBP12.53□□□□□ -0.4
UBE3B-205ENST00000535900 PAWRQ96IZ0 340 aaKnown RBP12.53□□□□□ -0.4
UBE3B-205ENST00000535900 C12orf42Q96LP6 360 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 APBA2Q99767 749 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 GPHNQ9NQX3 736 aaPredicted RBP12.53□□□□□ -0.4
UBE3B-205ENST00000535900 EMILIN3Q9NT22 766 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 GJD2Q9UKL4 321 aa12.53□□□□□ -0.4
UBE3B-205ENST00000535900 GOLGA8AA7E2F4 631 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 VCAM1P19320 739 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 RGS2P41220 211 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 CCNA1P78396 465 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 SCRN1Q12765 414 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 SEPT2Q15019 361 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 RTN1Q16799 776 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 GPR142Q7Z601 462 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
UBE3B-205ENST00000535900 ANKLE1Q8NAG6 615 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 GMCL1P1Q8NEA9 526 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 PORCNQ9H237 461 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 CHMP5Q9NZZ3 219 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
UBE3B-205ENST00000535900 CLIP2Q9UDT6 1046 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 NAP1L2Q9ULW6 460 aaPredicted RBP12.52□□□□□ -0.41
UBE3B-205ENST00000535900 FRMPD3Q5JV73 1810 aa12.52□□□□□ -0.41
UBE3B-205ENST00000535900 A0A0G2JMZ2 1700 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 EEF2P13639 858 aaKnown RBP12.51□□□□□ -0.41
UBE3B-205ENST00000535900 PDCP20941 246 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 GUCY1A2P33402 732 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 GRM4Q14833 912 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 GPATCH4Q5T3I0 446 aaKnown RBP12.51□□□□□ -0.41
UBE3B-205ENST00000535900 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 C7orf61Q8IZ16 206 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 DCAF4Q8WV16 495 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 KIAA1683Q9H0B3 1180 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 GOPCQ9HD26 462 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 RBPJLQ9UBG7 517 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 TMX2Q9Y320 296 aa12.51□□□□□ -0.41
UBE3B-205ENST00000535900 MYH4Q9Y623 1939 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 LARGE1O95461 756 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 SNHG28P0DPA3 235 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 XRCC5P13010 732 aaKnown RBP12.5□□□□□ -0.41
UBE3B-205ENST00000535900 IFNAR1P17181 557 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 STK3Q13188 491 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 TRIM22Q8IYM9 498 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 FAM177A1Q8N128 213 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-205ENST00000535900 ACER1Q8TDN7 264 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 NUP133Q8WUM0 1156 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 WASF1Q92558 559 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
UBE3B-205ENST00000535900 C11orf49Q9H6J7 331 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 RPAP3Q9H6T3 665 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-205ENST00000535900 RABGAP1Q9Y3P9 1069 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 IVNS1ABPQ9Y6Y0 642 aa12.5□□□□□ -0.41
UBE3B-205ENST00000535900 ZNF236Q9UL36 1845 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 STK36Q9NRP7 1315 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 SPDYE16A6NNV3 312 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-205ENST00000535900 PARP1P09874 1014 aaKnown RBP12.49□□□□□ -0.41
UBE3B-205ENST00000535900 CCT2P78371 535 aaKnown RBP12.49□□□□□ -0.41
UBE3B-205ENST00000535900 NUCB2P80303 420 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 Q3C1V9 767 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 MAP3K21Q5TCX8 1036 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 SIAH1Q8IUQ4 282 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 NECAB1Q8N987 351 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 SMARCC2Q8TAQ2 1214 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 LPAR1Q92633 364 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
UBE3B-205ENST00000535900 PALM3A6NDB9 673 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-205ENST00000535900 CNMDO75829 334 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 PDHBP11177 359 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 ATP2B2Q01814 1243 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 MAP2K5Q13163 448 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 CCL14Q16627 93 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 MORN1Q5T089 497 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 TMTC3Q6ZXV5 915 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 NSUN7Q8NE18 718 aaKnown RBP12.48□□□□□ -0.41
UBE3B-205ENST00000535900 SPZ1Q9BXG8 430 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 RNF26Q9BY78 433 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-205ENST00000535900 FAM217BQ9NTX9 383 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-205ENST00000535900 OGDHLQ9ULD0 1010 aa12.48□□□□□ -0.41
UBE3B-205ENST00000535900 ZMYND8Q9ULU4 1186 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms