RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 SLC4A8Q2Y0W8 1093 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 IFFO2Q5TF58 517 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 LBX2Q6XYB7 198 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 STK11IPQ8N1F8 1099 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 PRPF38AQ8NAV1 312 aaKnown RBP7.49□□□□□ -1.21
CDCA3-205ENST00000535871 HHIPL1Q96JK4 782 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 SLC26A6Q9BXS9 759 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 ZMYND12Q9H0C1 365 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 BRMS1Q9HCU9 246 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 BARHL2Q9NY43 387 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 MAP3K20Q9NYL2 800 aaKnown RBP7.49□□□□□ -1.21
CDCA3-205ENST00000535871 CFAP45Q9UL16 551 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 KCNH4Q9UQ05 1017 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 SLC45A1Q9Y2W3 748 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 AFG3L2Q9Y4W6 797 aa7.49□□□□□ -1.21
CDCA3-205ENST00000535871 A0A1W2PRG0 241 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 FAM196BA6NMK8 535 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 DDX11L8A8MPP1 907 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 ATP2A1O14983 1001 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 CYTH3O43739 400 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 BMP15O95972 392 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 HOXA7P31268 230 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-205ENST00000535871 INPP5BP32019 993 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 IRX5P78411 483 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-205ENST00000535871 JAG1P78504 1218 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 GHRHRQ02643 423 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 PPIL2Q13356 520 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-205ENST00000535871 CDAN1Q8IWY9 1227 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 MB21D1Q8N884 522 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 TMEM87AQ8NBN3 555 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 GTF3C2Q8WUA4 911 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-205ENST00000535871 MYL10Q9BUA6 226 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 PHF20Q9BVI0 1012 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 SCAND2PQ9GZW5 306 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-205ENST00000535871 ZCCHC17Q9NP64 241 aaKnown RBP7.48□□□□□ -1.21
CDCA3-205ENST00000535871 ADAMTS5Q9UNA0 930 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 ZDHHC9Q9Y397 364 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 V9GY48 417 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-205ENST00000535871 ELP1O95163 1332 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 PHIPQ8WWQ0 1821 aa7.48□□□□□ -1.21
CDCA3-205ENST00000535871 C19orf67A6NJJ6 358 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 PLEKHA8P1O95397 391 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 ZBTB48P10074 688 aaPredicted RBP7.47□□□□□ -1.21
CDCA3-205ENST00000535871 COPB2P35606 906 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 KIF23Q02241 960 aaPredicted RBP7.47□□□□□ -1.21
CDCA3-205ENST00000535871 PABPC4Q13310 644 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDCA3-205ENST00000535871 VGLL4Q14135 290 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 EAPPQ56P03 285 aaPredicted RBP7.47□□□□□ -1.21
CDCA3-205ENST00000535871 RILPL1Q5EBL4 403 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 SYDE2Q5VT97 1194 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 KRT40Q6A162 431 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 FASTKD5Q7L8L6 764 aaKnown RBP7.47□□□□□ -1.21
CDCA3-205ENST00000535871 NOSTRINQ8IVI9 506 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 ADGRF4Q8IZF3 695 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 LRRC47Q8N1G4 583 aaKnown RBP7.47□□□□□ -1.21
CDCA3-205ENST00000535871 STAG2Q8N3U4 1231 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 C2orf69Q8N8R5 385 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 ACER1Q8TDN7 264 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 TNPO1Q92973 898 aaKnown RBP7.47□□□□□ -1.21
CDCA3-205ENST00000535871 PHKBQ93100 1093 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 DDX11Q96FC9 970 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 ZNF396Q96N95 335 aaPredicted RBP7.47□□□□□ -1.21
CDCA3-205ENST00000535871 PHOX2BQ99453 314 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 FEZ1Q99689 392 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 AMNQ9BXJ7 453 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 JMJD4Q9H9V9 463 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 RRAGCQ9HB90 399 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 HOXC10Q9NYD6 342 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 TMOD4Q9NZQ9 345 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 SNCAIPQ9Y6H5 919 aa7.47□□□□□ -1.21
CDCA3-205ENST00000535871 BAZ2BQ9UIF8 2168 aaKnown RBP7.47□□□□□ -1.21
CDCA3-205ENST00000535871 A0A0G2JLL6 359 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-205ENST00000535871 USP17L15C9J2P7 530 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 USP17L13C9JLJ4 530 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 ADM5C9JUS6 153 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 USP17L11C9JVI0 530 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 USP17L18D6R9N7 530 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 USP17L22D6RA61 530 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 USP17L17D6RBQ6 530 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 USP17L19D6RCP7 530 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 USP17L20D6RJB6 530 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 M0R2N6 131 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 STXBP3O00186 592 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 PIK3CDO00329 1044 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 GALR2O43603 387 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-205ENST00000535871 YEATS4O95619 227 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 ITGBL1O95965 494 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-205ENST00000535871 FOSP01100 380 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-205ENST00000535871 VCAM1P19320 739 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 RXRAP19793 462 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 ECE1P42892 770 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 CLK2P49760 499 aaKnown RBP7.46□□□□□ -1.22
CDCA3-205ENST00000535871 MRPL12P52815 198 aaKnown RBP7.46□□□□□ -1.22
CDCA3-205ENST00000535871 INHBEP58166 350 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 KRT85P78386 507 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 ATP2B2Q01814 1243 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 USP17L24Q0WX57 530 aa7.46□□□□□ -1.22
CDCA3-205ENST00000535871 FSTL1Q12841 308 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms