RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 SOX1O00570 391 aaPredicted RBP19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 PGK1P00558 417 aa19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 SDSP20132 328 aa19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 PLEKHM2Q8IWE5 1019 aa19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 FERMT2Q96AC1 680 aa19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 OSBPL3Q9H4L5 887 aa19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 ACAD9Q9H845 621 aa19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 ZHX1Q9UKY1 873 aaPredicted RBP19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 FAM184BQ9ULE4 1060 aa19.12■□□□□ 0.65
CLSTN3-204ENST00000535313 SNAI1O95863 264 aaPredicted RBP19.11■□□□□ 0.65
CLSTN3-204ENST00000535313 NOVP48745 357 aa19.11■□□□□ 0.65
CLSTN3-204ENST00000535313 CCDC96Q2M329 555 aa19.11■□□□□ 0.65
CLSTN3-204ENST00000535313 TKFCQ3LXA3 575 aa19.11■□□□□ 0.65
CLSTN3-204ENST00000535313 DCAF4Q8WV16 495 aa19.11■□□□□ 0.65
CLSTN3-204ENST00000535313 LRCH3Q96II8 777 aa19.11■□□□□ 0.65
CLSTN3-204ENST00000535313 PHF24Q9UPV7 400 aa19.11■□□□□ 0.65
CLSTN3-204ENST00000535313 PCP11498 1178 aaKnown RBP19.1■□□□□ 0.65
CLSTN3-204ENST00000535313 HAND2P61296 217 aa19.1■□□□□ 0.65
CLSTN3-204ENST00000535313 TRIM60Q495X7 471 aa19.1■□□□□ 0.65
CLSTN3-204ENST00000535313 CCDC174Q6PII3 467 aa19.1■□□□□ 0.65
CLSTN3-204ENST00000535313 MFSD6Q6ZSS7 791 aa19.1■□□□□ 0.65
CLSTN3-204ENST00000535313 AGBL1Q96MI9 1066 aa19.1■□□□□ 0.65
CLSTN3-204ENST00000535313 RNF146Q9NTX7 359 aa19.1■□□□□ 0.65
CLSTN3-204ENST00000535313 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.1■□□□□ 0.65
CLSTN3-204ENST00000535313 PRR12Q9ULL5 1215 aa19.1■□□□□ 0.65
CLSTN3-204ENST00000535313 ZNF536O15090 1300 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 POTEB2H3BUK9 544 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 TOP1P11387 765 aaKnown RBP19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 ALAS1P13196 640 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 ACVR2BQ13705 512 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 SNX17Q15036 470 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 LRIT3Q3SXY7 679 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 AKNAD1Q5T1N1 836 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 C1orf53Q5VUE5 145 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 LENG1Q96BZ8 264 aaPredicted RBP19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 TRERF1Q96PN7 1200 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 ABHD16BQ9H3Z7 469 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 RNF41Q9H4P4 317 aaPredicted RBP19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 PRDM5Q9NQX1 630 aaPredicted RBP19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 TCP11L1Q9NUJ3 509 aa19.09■□□□□ 0.65
CLSTN3-204ENST00000535313 HIP1O00291 1037 aa19.08■□□□□ 0.64
CLSTN3-204ENST00000535313 SNAP25P60880 206 aa19.08■□□□□ 0.64
CLSTN3-204ENST00000535313 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
CLSTN3-204ENST00000535313 ARMCX2Q7L311 632 aa19.08■□□□□ 0.64
CLSTN3-204ENST00000535313 RASGRP2Q7LDG7 609 aa19.08■□□□□ 0.64
CLSTN3-204ENST00000535313 FGD4Q96M96 766 aa19.08■□□□□ 0.64
CLSTN3-204ENST00000535313 TMEM47Q9BQJ4 181 aa19.08■□□□□ 0.64
CLSTN3-204ENST00000535313 TSEN34Q9BSV6 310 aaKnown RBP19.08■□□□□ 0.64
CLSTN3-204ENST00000535313 ADAMTS4O75173 837 aa19.07■□□□□ 0.64
CLSTN3-204ENST00000535313 DUSP11O75319 330 aaKnown RBP19.07■□□□□ 0.64
CLSTN3-204ENST00000535313 CNTN2Q02246 1040 aa19.07■□□□□ 0.64
CLSTN3-204ENST00000535313 CCDC144CPQ8IYA2 1237 aa19.07■□□□□ 0.64
CLSTN3-204ENST00000535313 FAM133AQ8N9E0 248 aa19.07■□□□□ 0.64
CLSTN3-204ENST00000535313 SPC25Q9HBM1 224 aa19.07■□□□□ 0.64
CLSTN3-204ENST00000535313 A1CFQ9NQ94 594 aaKnown RBP19.07■□□□□ 0.64
CLSTN3-204ENST00000535313 CCPG1Q9ULG6 757 aa19.07■□□□□ 0.64
CLSTN3-204ENST00000535313 SUPT16HQ9Y5B9 1047 aaKnown RBP19.07■□□□□ 0.64
CLSTN3-204ENST00000535313 SYNRGQ9UMZ2 1314 aa19.06■□□□□ 0.64
CLSTN3-204ENST00000535313 A0A1W2PQ45 241 aaPredicted RBP19.06■□□□□ 0.64
CLSTN3-204ENST00000535313 A0A1W2PQY0 241 aa19.06■□□□□ 0.64
CLSTN3-204ENST00000535313 ZNF213O14771 459 aa19.06■□□□□ 0.64
CLSTN3-204ENST00000535313 GPR153Q6NV75 609 aa19.06■□□□□ 0.64
CLSTN3-204ENST00000535313 NUP133Q8WUM0 1156 aa19.06■□□□□ 0.64
CLSTN3-204ENST00000535313 ESR2Q92731 530 aa19.06■□□□□ 0.64
CLSTN3-204ENST00000535313 TTC14Q96N46 770 aa19.06■□□□□ 0.64
CLSTN3-204ENST00000535313 FRMPD2Q68DX3 1309 aaPredicted RBP19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 MOXD2PA6NHM9 499 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 ASB14A6NK59 587 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 ICAM1P05362 532 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 SLC16A2P36021 539 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 ACLYP53396 1101 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 TLE2Q04725 743 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 CCDC144BQ3MJ40 725 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 SYDE2Q5VT97 1194 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 TTBK2Q6IQ55 1244 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 BTNL9Q6UXG8 535 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 TBC1D10CQ8IV04 446 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 KLHDC9Q8NEP7 349 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 RANBP17Q9H2T7 1088 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 GPCPD1Q9NPB8 672 aa19.05■□□□□ 0.64
CLSTN3-204ENST00000535313 C6orf222P0C671 652 aaPredicted RBP19.04■□□□□ 0.64
CLSTN3-204ENST00000535313 NT5C2P49902 561 aa19.04■□□□□ 0.64
CLSTN3-204ENST00000535313 KCNA10Q16322 511 aa19.04■□□□□ 0.64
CLSTN3-204ENST00000535313 PCSK9Q8NBP7 692 aaKnown RBP19.04■□□□□ 0.64
CLSTN3-204ENST00000535313 STARD7Q9NQZ5 370 aa19.04■□□□□ 0.64
CLSTN3-204ENST00000535313 PDLIM7Q9NR12 457 aa19.04■□□□□ 0.64
CLSTN3-204ENST00000535313 SOWAHBA6NEL2 793 aa19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 PQBP1O60828 265 aaKnown RBP19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 CLTBP09497 229 aa19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 PDHBP11177 359 aa19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 CST5P28325 142 aaPredicted RBP19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 MUM1L1Q5H9M0 696 aa19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 NSMFQ6X4W1 530 aa19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 NOL8Q76FK4 1167 aaKnown RBP19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 CYP39A1Q9NYL5 469 aa19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 PNMA2Q9UL42 364 aa19.03■□□□□ 0.64
CLSTN3-204ENST00000535313 MCM3APO60318 1980 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 NEDD4P46934 1319 aa19.02■□□□□ 0.64
CLSTN3-204ENST00000535313 TRIM43BA6NCK2 446 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms