RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-204ENST00000535180 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-204ENST00000535180 TTC6Q86TZ1 520 aa13.1□□□□□ -0.31
VAMP1-204ENST00000535180 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
VAMP1-204ENST00000535180 NEUROD6Q96NK8 337 aa13.1□□□□□ -0.31
VAMP1-204ENST00000535180 FAM86C1Q9NVL1 165 aa13.1□□□□□ -0.31
VAMP1-204ENST00000535180 EPG5Q9HCE0 2579 aa13.09□□□□□ -0.31
VAMP1-204ENST00000535180 LCHNA4D1U4 455 aa13.09□□□□□ -0.31
VAMP1-204ENST00000535180 H3BQ06 376 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-204ENST00000535180 RFC2P35250 354 aa13.09□□□□□ -0.31
VAMP1-204ENST00000535180 TFCP2Q12800 502 aa13.09□□□□□ -0.31
VAMP1-204ENST00000535180 GORABQ5T7V8 394 aa13.09□□□□□ -0.31
VAMP1-204ENST00000535180 IRF2BPLQ9H1B7 796 aa13.09□□□□□ -0.31
VAMP1-204ENST00000535180 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-204ENST00000535180 DNAJC25-GNG10A0A024R161 153 aa13.08□□□□□ -0.32
VAMP1-204ENST00000535180 DYNLL1P63167 89 aaKnown RBP13.08□□□□□ -0.32
VAMP1-204ENST00000535180 SPICE1Q8N0Z3 855 aa13.08□□□□□ -0.32
VAMP1-204ENST00000535180 EDAQ92838 391 aa13.08□□□□□ -0.32
VAMP1-204ENST00000535180 PBXIP1Q96AQ6 731 aa13.08□□□□□ -0.32
VAMP1-204ENST00000535180 DDX11Q96FC9 970 aa13.08□□□□□ -0.32
VAMP1-204ENST00000535180 ALG13Q9NP73 1137 aaKnown RBP13.08□□□□□ -0.32
VAMP1-204ENST00000535180 MUTYHQ9UIF7 546 aa13.08□□□□□ -0.32
VAMP1-204ENST00000535180 ZNF214Q9UL59 606 aaPredicted RBP13.08□□□□□ -0.32
VAMP1-204ENST00000535180 PTPRCP08575 1304 aa13.08□□□□□ -0.32
VAMP1-204ENST00000535180 MYO7AQ13402 2215 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 VWA5AO00534 786 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
VAMP1-204ENST00000535180 IGSF3O75054 1194 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 BAIAP3O94812 1187 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 UQCRFS1P1P0C7P4 283 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 SUPT20HL2P0C7V6 817 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 USP5P45974 858 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 ERVK-21P61565 698 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 SUGP1Q8IWZ8 645 aaKnown RBP13.07□□□□□ -0.32
VAMP1-204ENST00000535180 MAGEB6Q8N7X4 407 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 ATOH1Q92858 354 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-204ENST00000535180 ALDH8A1Q9H2A2 487 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-204ENST00000535180 MTUS1Q9ULD2 1270 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-204ENST00000535180 ASTN1O14525 1302 aa13.07□□□□□ -0.32
VAMP1-204ENST00000535180 PROB1E7EW31 1015 aa13.06□□□□□ -0.32
VAMP1-204ENST00000535180 MPHOSPH10O00566 681 aaKnown RBP13.06□□□□□ -0.32
VAMP1-204ENST00000535180 CYP2C9P11712 490 aa13.06□□□□□ -0.32
VAMP1-204ENST00000535180 ID4P47928 161 aa13.06□□□□□ -0.32
VAMP1-204ENST00000535180 PLCD1P51178 756 aa13.06□□□□□ -0.32
VAMP1-204ENST00000535180 PSMC6P62333 389 aa13.06□□□□□ -0.32
VAMP1-204ENST00000535180 FSCN1Q16658 493 aaKnown RBP13.06□□□□□ -0.32
VAMP1-204ENST00000535180 REPS2Q8NFH8 660 aa13.06□□□□□ -0.32
VAMP1-204ENST00000535180 TGS1Q96RS0 853 aaKnown RBP13.06□□□□□ -0.32
VAMP1-204ENST00000535180 KATNBL1Q9H079 304 aa13.06□□□□□ -0.32
VAMP1-204ENST00000535180 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
VAMP1-204ENST00000535180 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-204ENST00000535180 NLRC5Q86WI3 1866 aa13.06□□□□□ -0.32
VAMP1-204ENST00000535180 ATG2AQ2TAZ0 1938 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 DMDP11532 3685 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 TMEM221A6NGB7 291 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 M0R296 226 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 ZEB2O60315 1214 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 KRT37O76014 449 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 UBTFL1P0CB47 393 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-204ENST00000535180 KCNJ6P48051 423 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 TNFAIP2Q03169 654 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 TRIM67Q6ZTA4 783 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 ARMCX2Q7L311 632 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 RNF135Q8IUD6 432 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 SIAH1Q8IUQ4 282 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 FBXL6Q8N531 539 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
VAMP1-204ENST00000535180 ZBED2Q9BTP6 218 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 FTOQ9C0B1 505 aaKnown RBP eCLIP13.05□□□□□ -0.32
VAMP1-204ENST00000535180 ARHGEF10LQ9HCE6 1279 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 TRMT13Q9NUP7 481 aaKnown RBP13.05□□□□□ -0.32
VAMP1-204ENST00000535180 FBXO28Q9NVF7 368 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
VAMP1-204ENST00000535180 TMX2Q9Y320 296 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 TNKSO95271 1327 aa13.05□□□□□ -0.32
VAMP1-204ENST00000535180 SCN10AQ9Y5Y9 1956 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-204ENST00000535180 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 GABPAQ06546 454 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 TMEM179Q6ZVK1 233 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 NOL8Q76FK4 1167 aaKnown RBP13.04□□□□□ -0.32
VAMP1-204ENST00000535180 TLK2Q86UE8 772 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 PABPC5Q96DU9 382 aaKnown RBP13.04□□□□□ -0.32
VAMP1-204ENST00000535180 FGD4Q96M96 766 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 POP1Q99575 1024 aaKnown RBP13.04□□□□□ -0.32
VAMP1-204ENST00000535180 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 SNRKQ9NRH2 765 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 PPP1R9AQ9ULJ8 1098 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 COL4A6Q14031 1691 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 GVINP1Q7Z2Y8 2422 aa13.04□□□□□ -0.32
VAMP1-204ENST00000535180 TPRP12270 2363 aaKnown RBP13.03□□□□□ -0.32
VAMP1-204ENST00000535180 LINC01553A4QN01 128 aa13.03□□□□□ -0.32
VAMP1-204ENST00000535180 PITPNM1O00562 1244 aa13.03□□□□□ -0.32
VAMP1-204ENST00000535180 CYP2E1P05181 493 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-204ENST00000535180 DDX10Q13206 875 aaKnown RBP13.03□□□□□ -0.32
VAMP1-204ENST00000535180 SMAD2Q15796 467 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms