RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 CSF1RP07333 972 aa17.73■□□□□ 0.43
MCF2L-232ENST00000535094 VAV2P52735 878 aa17.73■□□□□ 0.43
MCF2L-232ENST00000535094 NAPAP54920 295 aa17.73■□□□□ 0.43
MCF2L-232ENST00000535094 CHRNDQ07001 517 aa17.73■□□□□ 0.43
MCF2L-232ENST00000535094 ICE2Q659A1 982 aa17.73■□□□□ 0.43
MCF2L-232ENST00000535094 CADPS2Q86UW7 1296 aa17.73■□□□□ 0.43
MCF2L-232ENST00000535094 HPCAL4Q9UM19 191 aa17.73■□□□□ 0.43
MCF2L-232ENST00000535094 CAPN7Q9Y6W3 813 aa17.73■□□□□ 0.43
MCF2L-232ENST00000535094 OPA1O60313 960 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 TECP42680 631 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 PMS1P54277 932 aaKnown RBP17.72■□□□□ 0.43
MCF2L-232ENST00000535094 RASSF7Q02833 373 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 PACS2Q86VP3 889 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 BLIDQ8IZY5 108 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 LRRC1Q9BTT6 524 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 PSD3Q9NYI0 1048 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 RAB21Q9UL25 225 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 RGPD2P0DJD1 1756 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 TMCO5BA8MYB1 307 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 KRT18P05783 430 aaKnown RBP17.72■□□□□ 0.43
MCF2L-232ENST00000535094 SRBD1Q8N5C6 995 aaKnown RBP17.72■□□□□ 0.43
MCF2L-232ENST00000535094 LRRC37A3O60309 1634 aa17.72■□□□□ 0.43
MCF2L-232ENST00000535094 FAM237AA0A1B0GTK4 181 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 CALM1P0DP23 149 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 CALM2P0DP24 149 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 CALM3P0DP25 149 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 MYBL2P10244 700 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 TFAP4Q01664 338 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 NT5DC1Q5TFE4 455 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 ZNF444Q8N0Y2 327 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-232ENST00000535094 RRP36Q96EU6 259 aaKnown RBP17.71■□□□□ 0.43
MCF2L-232ENST00000535094 EVX2Q03828 476 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 FBXW10Q5XX13 1052 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 HDAC7Q8WUI4 952 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 PYM1Q9BRP8 204 aaKnown RBP17.71■□□□□ 0.43
MCF2L-232ENST00000535094 PRPF3O43395 683 aaKnown RBP17.71■□□□□ 0.43
MCF2L-232ENST00000535094 CALML3P27482 149 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 TAF4BQ92750 862 aa17.71■□□□□ 0.43
MCF2L-232ENST00000535094 LIMA1Q9UHB6 759 aaKnown RBP17.71■□□□□ 0.43
MCF2L-232ENST00000535094 LGALS16A8MUM7 142 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 LRRC41Q15345 812 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 TMC4Q7Z404 712 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 FAM114A1Q8IWE2 563 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 CRNKL1Q9BZJ0 848 aaKnown RBP17.7■□□□□ 0.42
MCF2L-232ENST00000535094 KANSL2Q9H9L4 492 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 SAP30BPQ9UHR5 308 aaKnown RBP17.7■□□□□ 0.42
MCF2L-232ENST00000535094 UBR1Q8IWV7 1749 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 ARID4AP29374 1257 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-232ENST00000535094 GUCY2DQ02846 1103 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 ALX1Q15699 326 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 CABP7Q86V35 215 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 CALML4Q96GE6 196 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 PPANQ9NQ55 473 aaKnown RBP17.7■□□□□ 0.42
MCF2L-232ENST00000535094 DMGDHQ9UI17 866 aaKnown RBP17.7■□□□□ 0.42
MCF2L-232ENST00000535094 FAM169AQ9Y6X4 670 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 LTN1O94822 1766 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 TSPY3P0CV98 308 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 TSPY8P0CW00 308 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 FCER1AP12319 257 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 EIF4A3P38919 411 aaKnown RBP17.7■□□□□ 0.42
MCF2L-232ENST00000535094 SUSD4Q5VX71 490 aa17.7■□□□□ 0.42
MCF2L-232ENST00000535094 TCRBV5S4A2TA0A5A2 114 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 ADGRA1Q86SQ6 560 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 TADA2BQ86TJ2 420 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 CDR1P51861 262 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 PROCA1Q8NCQ7 364 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-232ENST00000535094 CCDC43Q96MW1 224 aaKnown RBP17.69■□□□□ 0.42
MCF2L-232ENST00000535094 FTCDO95954 541 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 HERVK_113P62684 666 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 ATP2C1P98194 919 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-232ENST00000535094 PKN1Q16512 942 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 TMTC3Q6ZXV5 915 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 MS4A14Q96JA4 679 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 EFCC1Q9HA90 598 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 DISC1Q9NRI5 854 aa17.69■□□□□ 0.42
MCF2L-232ENST00000535094 PDE2AO00408 941 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-232ENST00000535094 SEMA3EO15041 775 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 ATP6V1AP38606 617 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 UBA5Q9GZZ9 404 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 ABCC12Q96J65 1359 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 RAPGEF1Q13905 1077 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 SPTY2D1Q68D10 685 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-232ENST00000535094 SAMD1Q6SPF0 538 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-232ENST00000535094 TICAM2Q86XR7 235 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 CEP57Q86XR8 500 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 PACSIN2Q9UNF0 486 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-232ENST00000535094 BICDL2A1A5D9 508 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 RCCD1A6NED2 376 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 PLCG1P19174 1290 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 PPFIA1Q13136 1202 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 PRPF4BQ13523 1007 aaKnown RBP17.68■□□□□ 0.42
MCF2L-232ENST00000535094 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-232ENST00000535094 APTXQ7Z2E3 356 aaKnown RBP17.68■□□□□ 0.42
MCF2L-232ENST00000535094 TRAPPC11Q7Z392 1133 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 NELFCDQ8IXH7 590 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 EPB41L5Q9HCM4 733 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 NFU1Q9UMS0 254 aa17.68■□□□□ 0.42
MCF2L-232ENST00000535094 REXO2Q9Y3B8 237 aaKnown RBP17.68■□□□□ 0.42
MCF2L-232ENST00000535094 CHD2O14647 1828 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms