RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 DDIT3P35638 169 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 RBM25P49756 843 aaKnown RBP7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 MLECQ14165 292 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 BECN1Q14457 450 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 SLC23A3Q6PIS1 610 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 MPRIPQ6WCQ1 1025 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 C8orf58Q8NAV2 365 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 TMEM40Q8WWA1 233 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 ASB11Q8WXH4 323 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 THUMPD2Q9BTF0 503 aaKnown RBP7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 PRDM10Q9NQV6 1147 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 TBX22Q9Y458 520 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 SAMM50Q9Y512 469 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 TUBGCP6Q96RT7 1819 aa7.38□□□□□ -1.23
TNFRSF1A-206ENST00000535038 ANKARQ7Z5J8 1434 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 CACNA1FO60840 1977 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 ACEP12821 1306 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 IGF2BP3O00425 579 aaKnown RBP eCLIP7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 ENC1O14682 589 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 FRAT2O75474 233 aaPredicted RBP7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 TRIM37O94972 964 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 RRS1Q15050 365 aaKnown RBP7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 BMP2KLQ5H9B9 411 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 LCE1DQ5T752 114 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 INTS3Q68E01 1043 aaKnown RBP7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 CHD1LQ86WJ1 897 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 GCC1Q96CN9 775 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 CEP44Q9C0F1 390 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 SRCIN1Q9C0H9 1055 aa7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 CHMP4BQ9H444 224 aaKnown RBP7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 GNEQ9Y223 722 aaKnown RBP7.37□□□□□ -1.23
TNFRSF1A-206ENST00000535038 FAM208AQ9UK61 1670 aaKnown RBP7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 DCDC2CA8MYV0 355 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 BMP6P22004 513 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 NTF4P34130 210 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 ZNF124Q15973 351 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 TWISTNBQ3B726 338 aaPredicted RBP7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 FAM214BQ7L5A3 538 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 C12orf40Q86WS4 652 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 AEBP1Q8IUX7 1158 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 GRIN3AQ8TCU5 1115 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 SNX21Q969T3 373 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 API5Q9BZZ5 524 aaKnown RBP7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 PPM1HQ9ULR3 514 aa7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 PHRF1Q9P1Y6 1649 aaKnown RBP7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 CEP170BQ9Y4F5 1589 aaPredicted RBP7.36□□□□□ -1.23
TNFRSF1A-206ENST00000535038 SBNO1A3KN83 1393 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 RTL1A6NKG5 1358 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 IGSF1Q8N6C5 1336 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 FAM83GA6ND36 823 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 FANCGO15287 622 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 FBXO24O75426 580 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 PAGE1O75459 146 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 IKZF1Q13422 519 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 PKN1Q16512 942 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 LLGL2Q6P1M3 1020 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 UBE3DQ7Z6J8 389 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 FBF1Q8TES7 1133 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 KIF2CQ99661 725 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 C22orf23Q9BZE7 217 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 DCTPP1Q9H773 170 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 PRDM7Q9NQW5 492 aa7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 CHD2O14647 1828 aaKnown RBP7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 ZNF142P52746 1687 aaPredicted RBP7.35□□□□□ -1.23
TNFRSF1A-206ENST00000535038 FLT4P35916 1363 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 MED1Q15648 1581 aaPredicted RBP7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 GNAT3A8MTJ3 354 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 MAPK8P45983 427 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 ZP2Q05996 745 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 RING1Q06587 406 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 LRRC14Q15048 493 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 ZBTB37Q5TC79 503 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 CDC37L1Q7L3B6 337 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 KSR1Q8IVT5 923 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 KCT2Q8NC54 265 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 FLAD1Q8NFF5 587 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 UPF2Q9HAU5 1272 aaKnown RBP7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 PCDHA4Q9UN74 947 aa7.34□□□□□ -1.23
TNFRSF1A-206ENST00000535038 PTPRCP08575 1304 aa7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 MAP3K19Q56UN5 1328 aa7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 DBX1A6NMT0 343 aa7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 NKPD1Q17RQ9 610 aa7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 HSP90AB2PQ58FF8 381 aa7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SULT6B1Q6IMI4 303 aa7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ANKRD44Q8N8A2 993 aa7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ELMO3Q96BJ8 720 aa7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 LNPKQ9C0E8 428 aa7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 PRDM5Q9NQX1 630 aaPredicted RBP7.33□□□□□ -1.24
TNFRSF1A-206ENST00000535038 NFAT5O94916 1531 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 HTATSF1O43719 755 aaKnown RBP7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 BRD1O95696 1058 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 EOMESO95936 686 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 CLCN7P51798 805 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 DCTN1Q14203 1278 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SCARA3Q6AZY7 606 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 ZSWIM9Q86XI8 627 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 SLC38A3Q99624 504 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 OSBPL7Q9BZF2 842 aa7.32□□□□□ -1.24
TNFRSF1A-206ENST00000535038 NCAPD2Q15021 1401 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms