RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 PPP1R18Q6NYC8 613 aa23.27■■□□□ 1.32
TNFRSF1A-205ENST00000534885 CDCA5Q96FF9 252 aa23.27■■□□□ 1.32
TNFRSF1A-205ENST00000534885 WDR18Q9BV38 432 aa23.27■■□□□ 1.32
TNFRSF1A-205ENST00000534885 NOL7Q9UMY1 257 aaKnown RBP23.27■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PCDHA1Q9Y5I3 950 aa23.27■■□□□ 1.32
TNFRSF1A-205ENST00000534885 ZHX2Q9Y6X8 837 aa23.27■■□□□ 1.32
TNFRSF1A-205ENST00000534885 SMCHD1A6NHR9 2005 aa23.27■■□□□ 1.32
TNFRSF1A-205ENST00000534885 TRIM75PA6NK02 468 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 GSE1Q14687 1217 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 ZSCAN23Q3MJ62 389 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 NOL9Q5SY16 702 aaKnown RBP23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 ZNF280CQ8ND82 737 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 LPAR1Q92633 364 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 KIFC2Q96AC6 838 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 EMILIN3Q9NT22 766 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CCDC194A0A1B0GVG4 234 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 ADCY7P51828 1080 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 ADALQ6DHV7 355 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CHURC1Q8WUH1 139 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 AS3MTQ9HBK9 375 aa23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 BIN2Q9UBW5 565 aaPredicted RBP23.26■■□□□ 1.31
TNFRSF1A-205ENST00000534885 PPP1R12BO60237 982 aaPredicted RBP23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 PPP6R2O75170 966 aa23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 TAL1P17542 331 aaPredicted RBP23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 BACE1P56817 501 aa23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 VGLL4Q14135 290 aa23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 TTC38Q5R3I4 469 aa23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 AXDND1Q5T1B0 1012 aaPredicted RBP23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 SAMD1Q6SPF0 538 aaPredicted RBP23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 PNMA8AQ86V59 439 aaPredicted RBP23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 REXO1Q8N1G1 1221 aaKnown RBP23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 GOLPH3LQ9H4A5 285 aa23.25■■□□□ 1.31
TNFRSF1A-205ENST00000534885 WDR46O15213 610 aaKnown RBP23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 PLA2G6O60733 806 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 USH1GQ495M9 461 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 FBXO11Q86XK2 927 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CCAR1Q8IX12 1150 aaKnown RBP23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 AMNQ9BXJ7 453 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 RIC8AQ9NPQ8 531 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 TMEM260Q9NX78 707 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 FEM1BQ9UK73 627 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 MRVI1Q9Y6F6 885 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 NR1I2O75469 434 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 VCAM1P19320 739 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 TRAPPC10P48553 1259 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 ZNF174Q15697 407 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 INF2Q27J81 1249 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 JAKMIP3Q5VZ66 844 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 SNCAIPQ9Y6H5 919 aa23.24■■□□□ 1.31
TNFRSF1A-205ENST00000534885 MAP3K9P80192 1104 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 FAM160B2Q86V87 743 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 JMYQ8N9B5 988 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 SYAP1Q96A49 352 aaPredicted RBP23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 DACT1Q9NYF0 836 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 USP14P54578 494 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 UBE2SQ16763 222 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 KRT25Q7Z3Z0 450 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CUL5Q93034 780 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CLIC6Q96NY7 704 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 PSTPIP2Q9H939 334 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CEP131Q9UPN4 1083 aa23.23■■□□□ 1.31
TNFRSF1A-205ENST00000534885 A0A1W2PQ27 194 aa23.22■■□□□ 1.31
TNFRSF1A-205ENST00000534885 A0A1W2PQ64 194 aa23.22■■□□□ 1.31
TNFRSF1A-205ENST00000534885 A0A1W2PQD8 194 aa23.22■■□□□ 1.31
TNFRSF1A-205ENST00000534885 MOB2Q70IA6 237 aa23.22■■□□□ 1.31
TNFRSF1A-205ENST00000534885 FSIP1Q8NA03 581 aa23.22■■□□□ 1.31
TNFRSF1A-205ENST00000534885 RANBP17Q9H2T7 1088 aaKnown RBP23.22■■□□□ 1.31
TNFRSF1A-205ENST00000534885 MCM7P33993 719 aa23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 HMGCS2P54868 508 aa23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CCDC183Q5T5S1 534 aa23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 TANGO6Q9C0B7 1094 aa23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CLEC11AQ9Y240 323 aa23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 NF2P35240 595 aa23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CLK2P49760 499 aaKnown RBP23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 GRIN1Q05586 938 aa23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 NONOQ15233 471 aaKnown RBP eCLIP23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 CCDC174Q6PII3 467 aa23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 MRPS27Q92552 414 aaKnown RBP23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 FBXO2Q9UK22 296 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 AFG3L2Q9Y4W6 797 aa23.21■■□□□ 1.31
TNFRSF1A-205ENST00000534885 A0A1B0GVL5 298 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 SYCE3A1L190 88 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 IREB2P48200 963 aaKnown RBP23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 KRI1Q8N9T8 703 aaKnown RBP23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 CNKSR2Q8WXI2 1034 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 RPAP3Q9H6T3 665 aaPredicted RBP23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 CSADQ9Y600 493 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 PARP14Q460N5 1801 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 USP17L15C9J2P7 530 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 USP17L13C9JLJ4 530 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 USP17L11C9JVI0 530 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 USP17L18D6R9N7 530 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 USP17L22D6RA61 530 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 USP17L17D6RBQ6 530 aa23.2■■□□□ 1.3
TNFRSF1A-205ENST00000534885 USP17L19D6RCP7 530 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms