RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SLC3A2P08195 630 aaKnown RBP10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 CYP2B6P20813 491 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 RASA1P20936 1047 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 ERVK-9P63128 1117 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 ERVK-24P63145 666 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 UBXN2AP68543 259 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 NMIQ13287 307 aaPredicted RBP10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 PLS1Q14651 629 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 KIAA1755Q5JYT7 1200 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 VPS53Q5VIR6 699 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 PLEKHM2Q8IWE5 1019 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 ANKK1Q8NFD2 765 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 C12orf42Q96LP6 360 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 RNF208Q9H0X6 261 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 SH2D4AQ9H788 454 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 KANSL2Q9H9L4 492 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 TOMM22Q9NS69 142 aa10.63□□□□□ -0.71
CCDC90B-219ENST00000534753 A0A0D9SFI3 127 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 FLOT1O75955 427 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 CCL5P13501 91 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 PDE4BQ07343 736 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 PPARAQ07869 468 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 FAM47AQ5JRC9 791 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 RNF19BQ6ZMZ0 732 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 SIAH1Q8IUQ4 282 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 PORCNQ9H237 461 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 ZNF287Q9HBT7 754 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 INCENPQ9NQS7 918 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 HELLSQ9NRZ9 838 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 MORF4L1Q9UBU8 362 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 CLIP2Q9UDT6 1046 aa10.62□□□□□ -0.71
CCDC90B-219ENST00000534753 SOWAHBA6NEL2 793 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 GPR37L1O60883 481 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 INHAP05111 366 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 TSPY3P0CV98 308 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 TSPY8P0CW00 308 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 MAPK4P31152 587 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 CCNA1P78396 465 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 TFAP4Q01664 338 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 COG2Q14746 738 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 MCMDC2Q4G0Z9 681 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 RRP12Q5JTH9 1297 aaKnown RBP10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 FAM83BQ5T0W9 1011 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 BLOC1S3Q6QNY0 202 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 GTF3C2Q8WUA4 911 aaPredicted RBP10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 UNC93B1Q9H1C4 597 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 VCPKMTQ9H867 229 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 DIAPH3Q9NSV4 1193 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 HOXC10Q9NYD6 342 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 BTBD7Q9P203 1132 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 MTMR7Q9Y216 660 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 TMX2Q9Y320 296 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 RABGAP1Q9Y3P9 1069 aa10.61□□□□□ -0.71
CCDC90B-219ENST00000534753 RANBP6O60518 1105 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 CNMDO75829 334 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 SDSP20132 328 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 HAND2P61296 217 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 TRIM32Q13049 653 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 IRF5Q13568 498 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 CWC27Q6UX04 472 aaKnown RBP10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 GPR142Q7Z601 462 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 PLEKHH3Q7Z736 793 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 LPAR1Q92633 364 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 ATG4CQ96DT6 458 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 NUDT12Q9BQG2 462 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 IVNS1ABPQ9Y6Y0 642 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 HTTP42858 3142 aa10.6□□□□□ -0.71
CCDC90B-219ENST00000534753 TSPY2A6NKD2 308 aa10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 WDR46O15213 610 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 TFRCP02786 760 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 ZNF589Q86UQ0 364 aaPredicted RBP10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 NCAPG2Q86XI2 1143 aa10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 LRRC47Q8N1G4 583 aaKnown RBP10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 WNT2BQ93097 391 aa10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 CEP95Q96GE4 821 aa10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 DEFB118Q96PH6 123 aa10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 FBXO28Q9NVF7 368 aa10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 GJD2Q9UKL4 321 aa10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 CTDP1Q9Y5B0 961 aaPredicted RBP10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 ROBO3Q96MS0 1386 aa10.59□□□□□ -0.71
CCDC90B-219ENST00000534753 CCDC171Q6TFL3 1326 aa10.58□□□□□ -0.71
CCDC90B-219ENST00000534753 F5H6K3 240 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 FOXP2O15409 715 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 NMT2O60551 498 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 FGAP02671 866 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 HSPD1P10809 573 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 ZKSCAN1P17029 563 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 RGS2P41220 211 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 KLRC3Q07444 240 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 IKQ13123 557 aaPredicted RBP10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 CCL14Q16627 93 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 SOCS4Q8WXH5 440 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 MOV10L1Q9BXT6 1211 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 OSBPL3Q9H4L5 887 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 NYAP2Q9P242 653 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 STX8Q9UNK0 236 aa10.58□□□□□ -0.72
CCDC90B-219ENST00000534753 TTLL1O95922 423 aa10.57□□□□□ -0.72
CCDC90B-219ENST00000534753 NDUFB10O96000 172 aa10.57□□□□□ -0.72
CCDC90B-219ENST00000534753 HMGCRP04035 888 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms