RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 SNX17Q15036 470 aa25.35■■□□□ 1.65
GSDMD-216ENST00000534602 RRP12Q5JTH9 1297 aaKnown RBP25.35■■□□□ 1.65
GSDMD-216ENST00000534602 C1orf53Q5VUE5 145 aa25.35■■□□□ 1.65
GSDMD-216ENST00000534602 MFSD6Q6ZSS7 791 aa25.35■■□□□ 1.65
GSDMD-216ENST00000534602 RNF180Q86T96 592 aa25.35■■□□□ 1.65
GSDMD-216ENST00000534602 RNF41Q9H4P4 317 aaPredicted RBP25.35■■□□□ 1.65
GSDMD-216ENST00000534602 PRR12Q9ULL5 1215 aa25.35■■□□□ 1.65
GSDMD-216ENST00000534602 ADCYAP1R1P41586 468 aa25.34■■□□□ 1.65
GSDMD-216ENST00000534602 RTP1P59025 263 aa25.34■■□□□ 1.65
GSDMD-216ENST00000534602 TTC14Q96N46 770 aa25.34■■□□□ 1.65
GSDMD-216ENST00000534602 DIAPH3Q9NSV4 1193 aa25.34■■□□□ 1.65
GSDMD-216ENST00000534602 FAM184BQ9ULE4 1060 aa25.34■■□□□ 1.65
GSDMD-216ENST00000534602 PHF24Q9UPV7 400 aa25.34■■□□□ 1.65
GSDMD-216ENST00000534602 SZT2Q5T011 3432 aa25.34■■□□□ 1.65
GSDMD-216ENST00000534602 MYCNP04198 464 aaPredicted RBP25.33■■□□□ 1.65
GSDMD-216ENST00000534602 HAND2P61296 217 aa25.33■■□□□ 1.65
GSDMD-216ENST00000534602 CWC27Q6UX04 472 aaKnown RBP25.33■■□□□ 1.65
GSDMD-216ENST00000534602 BTNL9Q6UXG8 535 aa25.33■■□□□ 1.65
GSDMD-216ENST00000534602 FGD4Q96M96 766 aa25.33■■□□□ 1.65
GSDMD-216ENST00000534602 AGBL1Q96MI9 1066 aa25.33■■□□□ 1.65
GSDMD-216ENST00000534602 TMEM47Q9BQJ4 181 aa25.33■■□□□ 1.65
GSDMD-216ENST00000534602 ABHD16BQ9H3Z7 469 aa25.33■■□□□ 1.65
GSDMD-216ENST00000534602 RNF146Q9NTX7 359 aa25.33■■□□□ 1.65
GSDMD-216ENST00000534602 FAM133AQ8N9E0 248 aa25.32■■□□□ 1.64
GSDMD-216ENST00000534602 UBE2OQ9C0C9 1292 aaKnown RBP25.32■■□□□ 1.64
GSDMD-216ENST00000534602 HOMER2Q9NSB8 354 aa25.32■■□□□ 1.64
GSDMD-216ENST00000534602 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.32■■□□□ 1.64
GSDMD-216ENST00000534602 POTEB2H3BUK9 544 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 ZNF213O14771 459 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 PGK1P00558 417 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 ACVR2BQ13705 512 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 CCDC96Q2M329 555 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 TDHQ8IZJ6 230 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 ESR2Q92731 530 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 CHMP4CQ96CF2 233 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 TRERF1Q96PN7 1200 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 TSEN34Q9BSV6 310 aaKnown RBP25.31■■□□□ 1.64
GSDMD-216ENST00000534602 A1CFQ9NQ94 594 aaKnown RBP25.31■■□□□ 1.64
GSDMD-216ENST00000534602 PRKAG2Q9UGJ0 569 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 LAMA3Q16787 3333 aa25.31■■□□□ 1.64
GSDMD-216ENST00000534602 ADAMTS4O75173 837 aa25.3■■□□□ 1.64
GSDMD-216ENST00000534602 LRIT3Q3SXY7 679 aa25.3■■□□□ 1.64
GSDMD-216ENST00000534602 TBC1D10CQ8IV04 446 aa25.3■■□□□ 1.64
GSDMD-216ENST00000534602 LBHD1Q9BQE6 289 aaPredicted RBP25.3■■□□□ 1.64
GSDMD-216ENST00000534602 RANBP17Q9H2T7 1088 aaKnown RBP25.3■■□□□ 1.64
GSDMD-216ENST00000534602 ZHX1Q9UKY1 873 aaPredicted RBP25.3■■□□□ 1.64
GSDMD-216ENST00000534602 ATP11BQ9Y2G3 1177 aa25.3■■□□□ 1.64
GSDMD-216ENST00000534602 DUSP11O75319 330 aaKnown RBP25.29■■□□□ 1.64
GSDMD-216ENST00000534602 ICAM1P05362 532 aa25.29■■□□□ 1.64
GSDMD-216ENST00000534602 ALAS1P13196 640 aa25.29■■□□□ 1.64
GSDMD-216ENST00000534602 CCDC174Q6PII3 467 aa25.29■■□□□ 1.64
GSDMD-216ENST00000534602 ARMCX2Q7L311 632 aa25.29■■□□□ 1.64
GSDMD-216ENST00000534602 RASGRP2Q7LDG7 609 aa25.29■■□□□ 1.64
GSDMD-216ENST00000534602 FERMT2Q96AC1 680 aa25.29■■□□□ 1.64
GSDMD-216ENST00000534602 DSCC1Q9BVC3 393 aa25.29■■□□□ 1.64
GSDMD-216ENST00000534602 MTMR7Q9Y216 660 aa25.29■■□□□ 1.64
GSDMD-216ENST00000534602 SOX1O00570 391 aaPredicted RBP25.28■■□□□ 1.64
GSDMD-216ENST00000534602 CNTN2Q02246 1040 aa25.28■■□□□ 1.64
GSDMD-216ENST00000534602 GPR153Q6NV75 609 aa25.28■■□□□ 1.64
GSDMD-216ENST00000534602 CCDC144CPQ8IYA2 1237 aa25.28■■□□□ 1.64
GSDMD-216ENST00000534602 PNMA2Q9UL42 364 aa25.28■■□□□ 1.64
GSDMD-216ENST00000534602 CCPG1Q9ULG6 757 aa25.28■■□□□ 1.64
GSDMD-216ENST00000534602 ASB14A6NK59 587 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 PDHBP11177 359 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 MDM2Q00987 491 aaPredicted RBP25.27■■□□□ 1.64
GSDMD-216ENST00000534602 TRIM60Q495X7 471 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 CCDC178Q5BJE1 867 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 SYDE2Q5VT97 1194 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 TTBK2Q6IQ55 1244 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 DGKHQ86XP1 1220 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 KLHDC9Q8NEP7 349 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 CTNNA3Q9UI47 895 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 SYNRGQ9UMZ2 1314 aa25.27■■□□□ 1.64
GSDMD-216ENST00000534602 MOXD2PA6NHM9 499 aa25.26■■□□□ 1.63
GSDMD-216ENST00000534602 SNHG28P0DPA3 235 aa25.26■■□□□ 1.63
GSDMD-216ENST00000534602 CST5P28325 142 aaPredicted RBP25.26■■□□□ 1.63
GSDMD-216ENST00000534602 SNAP25P60880 206 aa25.26■■□□□ 1.63
GSDMD-216ENST00000534602 CCDC144BQ3MJ40 725 aa25.26■■□□□ 1.63
GSDMD-216ENST00000534602 LENG1Q96BZ8 264 aaPredicted RBP25.26■■□□□ 1.63
GSDMD-216ENST00000534602 KATNBL1Q9H079 304 aa25.26■■□□□ 1.63
GSDMD-216ENST00000534602 CYP39A1Q9NYL5 469 aa25.26■■□□□ 1.63
GSDMD-216ENST00000534602 NEDD4P46934 1319 aa25.26■■□□□ 1.63
GSDMD-216ENST00000534602 LAMA4Q16363 1823 aa25.26■■□□□ 1.63
GSDMD-216ENST00000534602 A0A1W2PQ45 241 aaPredicted RBP25.25■■□□□ 1.63
GSDMD-216ENST00000534602 A0A1W2PQY0 241 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 SOWAHBA6NEL2 793 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 SLC16A2P36021 539 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 ACLYP53396 1101 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 ZNF543Q08ER8 600 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 MUM1L1Q5H9M0 696 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 CCSAPQ6IQ19 270 aaPredicted RBP25.25■■□□□ 1.63
GSDMD-216ENST00000534602 IQCA1Q86XH1 822 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 NUP133Q8WUM0 1156 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 UPF3AQ9H1J1 476 aaKnown RBP25.25■■□□□ 1.63
GSDMD-216ENST00000534602 SPC25Q9HBM1 224 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 GPCPD1Q9NPB8 672 aa25.25■■□□□ 1.63
GSDMD-216ENST00000534602 MCM3APO60318 1980 aa25.24■■□□□ 1.63
GSDMD-216ENST00000534602 FRMPD2Q68DX3 1309 aaPredicted RBP25.24■■□□□ 1.63
GSDMD-216ENST00000534602 PDE4AP27815 886 aa25.24■■□□□ 1.63
GSDMD-216ENST00000534602 IMMTQ16891 758 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms