RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 ZNF417Q8TAU3 575 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 DOT1LQ8TEK3 1739 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 CPLX3Q8WVH0 158 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 EDARADDQ8WWZ3 215 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 WNT8BQ93098 351 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 BTBD6Q96KE9 485 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 ZNF587Q96SQ5 575 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 ZC3H12CQ9C0D7 883 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 STAP2Q9UGK3 403 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 POLR3KQ9Y2Y1 108 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 RNF123Q5XPI4 1314 aa6.46□□□□□ -1.38
ECHDC1-223ENST00000534442 INSRP06213 1382 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 ANKRD36BQ8N2N9 1353 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 FASNP49327 2511 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 PPLO60437 1756 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 FAM155AB1AL88 458 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 FSCN2O14926 492 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 LILRB5O75023 590 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 GCP02774 474 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 CTSBP07858 339 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 MCM4P33991 863 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 COL9A3Q14050 684 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 NBPF6Q5VWK0 638 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 CHSY3Q70JA7 882 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 REXO1Q8N1G1 1221 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 FAM169BQ8N8A8 192 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 GALNT6Q8NCL4 622 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 KCNB2Q92953 911 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 NBPF4Q96M43 638 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 OSGEPQ9NPF4 335 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 PRKAG3Q9UGI9 489 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 WDFY4Q6ZS81 3184 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 GPR179Q6PRD1 2367 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 TTC21AQ8NDW8 1320 aa6.45□□□□□ -1.38
ECHDC1-223ENST00000534442 CCDC7Q96M83 1385 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 FLNBO75369 2602 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 SHISA8B8ZZ34 492 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 OIP5O43482 229 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 GIPRP48546 466 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 ZNF165P49910 485 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 NHLH1Q02575 133 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 RPL6Q02878 288 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 LRIT3Q3SXY7 679 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 ZNF787Q6DD87 383 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 WFDC8Q8IUA0 241 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 GPBAR1Q8TDU6 330 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 HNRNPLLQ8WVV9 542 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 KLHDC7BQ96G42 594 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 CCDC86Q9H6F5 360 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 ZNF292O60281 2723 aa6.44□□□□□ -1.38
ECHDC1-223ENST00000534442 GFRA2O00451 464 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 SMAD7O15105 426 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 ZNF862O60290 1169 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 BPNT1O95861 308 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 CYP11A1P05108 521 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 SLURP2P0DP57 97 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 MAOBP27338 520 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 ARL4DP49703 201 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 EIF6P56537 245 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 BMS1Q14692 1282 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 SETDB1Q15047 1291 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 POU4F3Q15319 338 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 FAM117BQ6P1L5 589 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 GK5Q6ZS86 529 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 GALNT11Q8NCW6 608 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 FERD3LQ96RJ6 166 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 EHMT1Q9H9B1 1298 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 ZNRF3Q9ULT6 936 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 NR2E3Q9Y5X4 410 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 CDH23Q9H251 3354 aa6.43□□□□□ -1.38
ECHDC1-223ENST00000534442 WTIPA6NIX2 430 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 ATE1O95260 518 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 TBC1D8O95759 1140 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 NID1P14543 1247 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 TMF1P82094 1093 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 RAB33AQ14088 237 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 INPP5AQ14642 412 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 TMEM31Q5JXX7 168 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 ZNF746Q6NUN9 644 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 NLGN1Q8N2Q7 840 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 IRF7Q92985 503 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 WDR89Q96FK6 387 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 UHRF1Q96T88 793 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 CORO1BQ9BR76 489 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 KRT82Q9NSB4 513 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 PCDHA4Q9UN74 947 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 PCDHB14Q9Y5E9 798 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 ZNF541Q9H0D2 1346 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 ABCC11Q96J66 1382 aa6.42□□□□□ -1.38
ECHDC1-223ENST00000534442 DCHS1Q96JQ0 3298 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 TLDC2A0PJX2 215 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 K7ELQ4 463 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 DDX3YO15523 660 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 EIF4EBP3O60516 100 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 ADAM11O75078 769 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 DLGAP3O95886 979 aa6.41□□□□□ -1.38
ECHDC1-223ENST00000534442 BCRP11274 1271 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms