RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CYP2D7A0A087X1C5 515 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 GOLGA6BA6NDN3 693 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 ZEB2O60315 1214 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 EZRP15311 586 aaKnown RBP21.42■■□□□ 1.02
SMPD1-210ENST00000534405 SNCBQ16143 134 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 RILPL1Q5EBL4 403 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 RCSD1Q6JBY9 416 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 CCDC26Q8TAB7 109 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 FAM210AQ96ND0 272 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 RNF41Q9H4P4 317 aaPredicted RBP21.42■■□□□ 1.02
SMPD1-210ENST00000534405 SLC40A1Q9NP59 571 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 MYO1AQ9UBC5 1043 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 MYO6Q9UM54 1294 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 RREB1Q92766 1687 aa21.42■■□□□ 1.02
SMPD1-210ENST00000534405 FAM205CA6NFA0 338 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 AKR1B15C9JRZ8 316 aaPredicted RBP21.41■■□□□ 1.02
SMPD1-210ENST00000534405 MPHOSPH10O00566 681 aaKnown RBP21.41■■□□□ 1.02
SMPD1-210ENST00000534405 POLR2DO15514 142 aaKnown RBP21.41■■□□□ 1.02
SMPD1-210ENST00000534405 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 USP49Q70CQ1 688 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 GRAMD1CQ8IYS0 662 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 TMTC2Q8N394 836 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 RIOK1Q9BRS2 568 aaKnown RBP21.41■■□□□ 1.02
SMPD1-210ENST00000534405 UBAC1Q9BSL1 405 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 SERTAD1Q9UHV2 236 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 MAN1B1Q9UKM7 699 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 LAMB2P55268 1798 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 HSP90AA4PQ58FG1 418 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 MAB21L3Q8N8X9 362 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 MTA3Q9BTC8 594 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 SPATA31A1Q5TZJ5 1347 aa21.41■■□□□ 1.02
SMPD1-210ENST00000534405 MAGEB6P1A0A0J9YX57 407 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 DYNLL1P63167 89 aaKnown RBP21.4■■□□□ 1.02
SMPD1-210ENST00000534405 ZNF827Q17R98 1081 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 CCDC13Q8IYE1 715 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 ZNF384Q8TF68 577 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 SELENOOQ9BVL4 669 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 TTF2Q9UNY4 1162 aaKnown RBP21.4■■□□□ 1.02
SMPD1-210ENST00000534405 MYH2Q9UKX2 1941 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 hCG_1642624A0A1W2PR95 340 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 CDR1P51861 262 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 RWDD2BP57060 319 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 DRP2Q13474 957 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 POSTNQ15063 836 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 CABP5Q9NP86 173 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 ANAPC4Q9UJX5 808 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 GGA2Q9UJY4 613 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 CACNA1SQ13698 1873 aa21.4■■□□□ 1.02
SMPD1-210ENST00000534405 EME2A4GXA9 379 aaPredicted RBP21.39■■□□□ 1.02
SMPD1-210ENST00000534405 ADAMTS2O95450 1211 aa21.39■■□□□ 1.02
SMPD1-210ENST00000534405 MYBL2P10244 700 aa21.39■■□□□ 1.02
SMPD1-210ENST00000534405 FMR1Q06787 632 aaKnown RBP eCLIP21.39■■□□□ 1.02
SMPD1-210ENST00000534405 ERFEQ4G0M1 354 aa21.39■■□□□ 1.02
SMPD1-210ENST00000534405 EARS2Q5JPH6 523 aaKnown RBP21.39■■□□□ 1.02
SMPD1-210ENST00000534405 NCAPH2Q6IBW4 605 aa21.39■■□□□ 1.02
SMPD1-210ENST00000534405 ENAHQ8N8S7 591 aaPredicted RBP21.39■■□□□ 1.02
SMPD1-210ENST00000534405 CDC5LQ99459 802 aaKnown RBP21.39■■□□□ 1.02
SMPD1-210ENST00000534405 BAZ2AQ9UIF9 1905 aaKnown RBP21.39■■□□□ 1.01
SMPD1-210ENST00000534405 ZNF18P17022 549 aa21.39■■□□□ 1.01
SMPD1-210ENST00000534405 RCAN1P53805 252 aa21.39■■□□□ 1.01
SMPD1-210ENST00000534405 NAP1L1P55209 391 aaKnown RBP21.39■■□□□ 1.01
SMPD1-210ENST00000534405 PKN1Q16512 942 aa21.39■■□□□ 1.01
SMPD1-210ENST00000534405 FAM228AQ86W67 206 aa21.39■■□□□ 1.01
SMPD1-210ENST00000534405 CEP57Q86XR8 500 aa21.39■■□□□ 1.01
SMPD1-210ENST00000534405 PARP9Q8IXQ6 854 aa21.39■■□□□ 1.01
SMPD1-210ENST00000534405 ELOA2Q8IYF1 753 aaPredicted RBP21.39■■□□□ 1.01
SMPD1-210ENST00000534405 VPS54Q9P1Q0 977 aa21.39■■□□□ 1.01
SMPD1-210ENST00000534405 MYH6P13533 1939 aa21.39■■□□□ 1.01
SMPD1-210ENST00000534405 GCKP35557 465 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 EVX2Q03828 476 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 FUT2Q10981 343 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 ZC3H12AQ5D1E8 599 aaKnown RBP21.38■■□□□ 1.01
SMPD1-210ENST00000534405 ESR2Q92731 530 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 MED15Q96RN5 788 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 CSRNP2Q9H175 543 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 SRPRBQ9Y5M8 271 aaKnown RBP21.38■■□□□ 1.01
SMPD1-210ENST00000534405 ROBO1Q9Y6N7 1651 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 PRDM1O75626 825 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 EPB41P11171 864 aaKnown RBP21.38■■□□□ 1.01
SMPD1-210ENST00000534405 SARSP49591 514 aaKnown RBP21.38■■□□□ 1.01
SMPD1-210ENST00000534405 NT5DC1Q5TFE4 455 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 PLCD4Q9BRC7 762 aa21.38■■□□□ 1.01
SMPD1-210ENST00000534405 COL22A1Q8NFW1 1626 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-210ENST00000534405 TTC36A6NLP5 189 aa21.37■■□□□ 1.01
SMPD1-210ENST00000534405 KCNQ2O43526 872 aa21.37■■□□□ 1.01
SMPD1-210ENST00000534405 ACTN4O43707 911 aaKnown RBP21.37■■□□□ 1.01
SMPD1-210ENST00000534405 CDCA2Q69YH5 1023 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-210ENST00000534405 HOMEZQ8IX15 550 aa21.37■■□□□ 1.01
SMPD1-210ENST00000534405 RNF26Q9BY78 433 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-210ENST00000534405 CENPHQ9H3R5 247 aa21.37■■□□□ 1.01
SMPD1-210ENST00000534405 A0A1B0GUL6 1792 aa21.37■■□□□ 1.01
SMPD1-210ENST00000534405 PLEKHA8P1O95397 391 aa21.37■■□□□ 1.01
SMPD1-210ENST00000534405 NAA25Q14CX7 972 aa21.37■■□□□ 1.01
SMPD1-210ENST00000534405 CCNI2Q6ZMN8 369 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-210ENST00000534405 TRMT44Q8IYL2 757 aaKnown RBP21.37■■□□□ 1.01
SMPD1-210ENST00000534405 ZNF579Q8NAF0 562 aaKnown RBP21.37■■□□□ 1.01
SMPD1-210ENST00000534405 FRMD3A2A2Y4 597 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 WNT7AO00755 349 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 NR1I3Q14994 352 aa21.36■■□□□ 1.01
SMPD1-210ENST00000534405 MICAL1Q8TDZ2 1067 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms