RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 PIH1D3Q9NQM4 214 aaKnown RBP12.42□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 MUTYHQ9UIF7 546 aa12.42□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 WDR87Q6ZQQ6 2873 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 DYNC1LI2O43237 492 aaPredicted RBP12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 PFKMP08237 780 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 TNFAIP2Q03169 654 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 FSCN1Q16658 493 aaKnown RBP12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ARMCX2Q7L311 632 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 SIAH1Q8IUQ4 282 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 PPP1R13LQ8WUF5 828 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 VCPKMTQ9H867 229 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ARHGEF10LQ9HCE6 1279 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 LMCD1Q9NZU5 365 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ZNF214Q9UL59 606 aaPredicted RBP12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 RIPK3Q9Y572 518 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 FOCADQ5VW36 1801 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 COL4A4P53420 1690 aaPredicted RBP12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 MYH1P12882 1939 aa12.41□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ASTN1O14525 1302 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 RBAK-RBAKDNI3L0D1 243 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 WDR46O15213 610 aaKnown RBP12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 IDH1O75874 414 aaKnown RBP12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 CABYRO75952 493 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 IRS1P35568 1242 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ZAP70P43403 619 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ICA1Q05084 483 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ZP2Q05996 745 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 TCF15Q12870 199 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 SNRNP48Q6IEG0 339 aaKnown RBP12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 CCDC144CPQ8IYA2 1237 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 MAGEB6Q8N7X4 407 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 SSH1Q8WYL5 1049 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ALDH8A1Q9H2A2 487 aaPredicted RBP12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 ADAMTS5Q9UNA0 930 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 TMX2Q9Y320 296 aa12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 PTPRZ1P23471 2315 aaPredicted RBP12.4□□□□□ -0.42
NEDD8-MDP1-202ENST00000534348 DCHS1Q96JQ0 3298 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 KCNJ6P48051 423 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 PUS10Q3MIT2 529 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 FAM83BQ5T0W9 1011 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 TMEM179Q6ZVK1 233 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 TLK2Q86UE8 772 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 ANKRD35Q8N283 1001 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 PBXIP1Q96AQ6 731 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 AP5M1Q9H0R1 490 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 DDX49Q9Y6V7 483 aaKnown RBP12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 COL11A1P12107 1806 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 DNAJC25-GNG10A0A024R161 153 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 ZEB2O60315 1214 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 AKR1B1P15121 316 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 COPB2P35606 906 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CCDC158Q5M9N0 1113 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 TMEM63BQ5T3F8 832 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 FAM117BQ6P1L5 589 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 REPS2Q8NFH8 660 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 NEK9Q8TD19 979 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 ATOH1Q92858 354 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 DYNLL2Q96FJ2 89 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CRBNQ96SW2 442 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 SH2D4AQ9H788 454 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 MCM9Q9NXL9 1143 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 SCN5AQ14524 2016 aa12.38□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 TNKSO95271 1327 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 SOWAHBA6NEL2 793 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CYP2D6P10635 497 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 GABPAQ06546 454 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CLUL1Q15846 466 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 FAM47CQ5HY64 1035 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 ZNF467Q7Z7K2 595 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 ADHFE1Q8IWW8 467 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 FGD4Q96M96 766 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 NUP88Q99567 741 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 MEIS3Q99687 375 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 DBNDD2Q9BQY9 259 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 TEX13BQ9BXU2 312 aa12.37□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 DMDP11532 3685 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 SUPT20HL2P0C7V6 817 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 SMPD1P17405 629 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 DEFB103AP81534 67 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CNTN2Q02246 1040 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 G3BP1Q13283 466 aaKnown RBP eCLIP12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 EEPD1Q7L9B9 569 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 SUGP1Q8IWZ8 645 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 KATNBL1Q9H079 304 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 PDGFCQ9NRA1 345 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 GNEQ9Y223 722 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 FAM50BQ9Y247 325 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 CACNA1GO43497 2377 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 VPS13AQ96RL7 3174 aa12.36□□□□□ -0.43
NEDD8-MDP1-202ENST00000534348 LINC01553A4QN01 128 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms