RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 FLOT1O75955 427 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 CD4P01730 458 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ASGR1P07306 291 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ACRP10323 421 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 TAL1P17542 331 aaPredicted RBP11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 KCNQ1P51787 676 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 GABPAQ06546 454 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 TMEM132BQ14DG7 1078 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MAMDC4Q6UXC1 1216 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 FAM126BQ8IXS8 530 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 RPUSD2Q8IZ73 545 aaKnown RBP11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MEIS3Q99687 375 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SNRKQ9NRH2 765 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 YBX2Q9Y2T7 364 aaKnown RBP11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 WDR46O15213 610 aaKnown RBP11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PLCD1P51178 756 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 FOSBP53539 338 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 GJA9P57773 515 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PTGDRQ13258 359 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SKIV2LQ15477 1246 aaKnown RBP11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 TMEM179Q6ZVK1 233 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 VTI1AQ96AJ9 217 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ATG4CQ96DT6 458 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PPP1R12CQ9BZL4 782 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ARHGEF10LQ9HCE6 1279 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SMC4Q9NTJ3 1288 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 TMX2Q9Y320 296 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MTCH2Q9Y6C9 303 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MYH8P13535 1937 aa11.26□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PRR33A8MZF0 331 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SMIM22K7EJ46 135 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MPHOSPH10O00566 681 aaKnown RBP11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 POLR3DP05423 398 aaPredicted RBP11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PGK2P07205 417 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 C6orf222P0C671 652 aaPredicted RBP11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 STAT3P40763 770 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ZAP70P43403 619 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 NKX3-2P78367 333 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MICALL1Q8N3F8 863 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SLC43A3Q8NBI5 491 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 HLA-CQ95604 372 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 CDCA7LQ96GN5 454 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 UPF3AQ9H1J1 476 aaKnown RBP11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 KCNH6Q9H252 994 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 VCPKMTQ9H867 229 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 C11orf16Q9NQ32 467 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SLC4A7Q9Y6M7 1214 aa11.25□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SNAI1O95863 264 aaPredicted RBP11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 CT47B1P0C2W7 299 aaPredicted RBP11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 CYP2C18P33260 490 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 GNASQ5JWF2 1037 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 KIAA1755Q5JYT7 1200 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 OTOP2Q7RTS6 562 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MIGA1Q8NAN2 632 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 KHSRPQ92945 711 aaKnown RBP eCLIP11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 LENG1Q96BZ8 264 aaPredicted RBP11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SNX27Q96L92 541 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ABHD16BQ9H3Z7 469 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 HIPK3Q9H422 1215 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SWAP70Q9UH65 585 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 NOB1Q9ULX3 412 aaKnown RBP11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 FPGT-TNNI3KV9GXZ4 949 aa11.24□□□□□ -0.61
SOX9-AS1-213ENST00000533996 NAV1Q8NEY1 1877 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 VWA5AO00534 786 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 CABYRO75952 493 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PFKMP08237 780 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ACVR2BQ13705 512 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 TMEM67Q5HYA8 995 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MAGEB6Q8N7X4 407 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ARHGAP45Q92619 1136 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ZDHHC16Q969W1 377 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 DBNDD2Q9BQY9 259 aa11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PIH1D3Q9NQM4 214 aaKnown RBP11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ZNF214Q9UL59 606 aaPredicted RBP11.23□□□□□ -0.61
SOX9-AS1-213ENST00000533996 DNAJC25-GNG10A0A024R161 153 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MYADML2A6NDP7 307 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 IDH1O75874 414 aaKnown RBP11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 GNAI2P04899 355 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ATP2A2P16615 1042 aaKnown RBP11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 MRE11P49959 708 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 RABGGTBP53611 331 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SLFN5Q08AF3 891 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SIAH1Q8IUQ4 282 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PHOSPHO2Q8TCD6 241 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 DDX11Q96FC9 970 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 RIOK1Q9BRS2 568 aaKnown RBP11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ZHX1Q9UKY1 873 aaPredicted RBP11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PPP1R9AQ9ULJ8 1098 aa11.22□□□□□ -0.61
SOX9-AS1-213ENST00000533996 ICA1Q05084 483 aa11.21□□□□□ -0.61
SOX9-AS1-213ENST00000533996 CCDC144BQ3MJ40 725 aa11.21□□□□□ -0.61
SOX9-AS1-213ENST00000533996 SPICE1Q8N0Z3 855 aa11.21□□□□□ -0.61
SOX9-AS1-213ENST00000533996 REPS2Q8NFH8 660 aa11.21□□□□□ -0.61
SOX9-AS1-213ENST00000533996 CDHR5Q9HBB8 845 aa11.21□□□□□ -0.61
SOX9-AS1-213ENST00000533996 LMCD1Q9NZU5 365 aa11.21□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PRRC2BQ5JSZ5 2229 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms