RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 VAMP4O75379 141 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 PDIA4P13667 645 aaKnown RBP7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 ITIH2P19823 946 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 AKAP12Q02952 1782 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 RING1Q06587 406 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 PPM1JQ5JR12 505 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 TTC21BQ7Z4L5 1316 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 CHD1LQ86WJ1 897 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 ITPRIPQ8IWB1 547 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 FAM168AQ92567 244 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 GBP4Q96PP9 640 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 TRPM3Q9HCF6 1732 aaPredicted RBP7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 CD163L1Q9NR16 1453 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 POLKQ9UBT6 870 aa7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 NOB1Q9ULX3 412 aaKnown RBP7.14□□□□□ -1.27
CLNS1A-212ENST00000533957 COL22A1Q8NFW1 1626 aaPredicted RBP7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 IGF2BP3O00425 579 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 ENC1O14682 589 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 HMMRO75330 724 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 NTF4P34130 210 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 TNNT2P45379 298 aaPredicted RBP7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 ANGEL2Q5VTE6 544 aaKnown RBP7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 SLC23A3Q6PIS1 610 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 TPTE2Q6XPS3 522 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 CLEC17AQ6ZS10 378 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 C12orf40Q86WS4 652 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 TMEM40Q8WWA1 233 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 CEP44Q9C0F1 390 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 ANTXR1Q9H6X2 564 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 CWC22Q9HCG8 908 aaKnown RBP7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 PRDM10Q9NQV6 1147 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 GTF2IRD1Q9UHL9 959 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 HDAC5Q9UQL6 1122 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 LAS1LQ9Y4W2 734 aaKnown RBP7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 KIF20BQ96Q89 1820 aa7.13□□□□□ -1.27
CLNS1A-212ENST00000533957 MED1Q15648 1581 aaPredicted RBP7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 RTL1A6NKG5 1358 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 TTC21AQ8NDW8 1320 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 PAGE1O75459 146 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 FARP2O94887 1054 aaPredicted RBP7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 TRIM37O94972 964 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 MAPK1P28482 360 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 GSTT1P30711 240 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 IL13P35225 146 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 MCM2P49736 904 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 INTS3Q68E01 1043 aaKnown RBP7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 FAM43AQ8N2R8 423 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 ASB11Q8WXH4 323 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 OSBPL7Q9BZF2 842 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 SRCIN1Q9C0H9 1055 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 SAMM50Q9Y512 469 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 ALS2Q96Q42 1657 aa7.12□□□□□ -1.27
CLNS1A-212ENST00000533957 ABCC4O15439 1325 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 MON2Q7Z3U7 1717 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 DCDC2CA8MYV0 355 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 FANCGO15287 622 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 RLBP1P12271 317 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 PRKAR2BP31323 418 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 MRE11P49959 708 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 NUCB2P80303 420 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 ZNF124Q15973 351 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 UBE3DQ7Z6J8 389 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 DCTPP1Q9H773 170 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 PRDM7Q9NQW5 492 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 PICK1Q9NRD5 415 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 STK26Q9P289 416 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 RRP7AQ9Y3A4 280 aaKnown RBP7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 NRKQ7Z2Y5 1582 aa7.11□□□□□ -1.27
CLNS1A-212ENST00000533957 REC8O95072 547 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 MCM4P33991 863 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 NKPD1Q17RQ9 610 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 TWISTNBQ3B726 338 aaPredicted RBP7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 ZBTB37Q5TC79 503 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 CDC37L1Q7L3B6 337 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 SPACA3Q8IXA5 215 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 TMEM57Q8N5G2 664 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 FBF1Q8TES7 1133 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 PPM1HQ9ULR3 514 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 PCDHA4Q9UN74 947 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 C1orf167Q5SNV9 1468 aa7.1□□□□□ -1.27
CLNS1A-212ENST00000533957 ARHGEF10O15013 1369 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 IBTKQ9P2D0 1353 aaPredicted RBP7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 PHRF1Q9P1Y6 1649 aaKnown RBP7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 GOLGA6L3A6NEY3 463 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 CHL1O00533 1208 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 TOM1O60784 492 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 CDC45O75419 566 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 FBXO24O75426 580 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 FRAT2O75474 233 aaPredicted RBP7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 BRD1O95696 1058 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 EOMESO95936 686 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 CCT4P50991 539 aaKnown RBP7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 LRRC14Q15048 493 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 RABEP1Q15276 862 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 RASIP1Q5U651 963 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 SCARA3Q6AZY7 606 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 LLGL2Q6P1M3 1020 aa7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 ANP32BQ92688 251 aaKnown RBP7.09□□□□□ -1.27
CLNS1A-212ENST00000533957 USP54Q70EL1 1684 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms