RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ZNF804BA4D1E1 1349 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 ITIH6Q6UXX5 1313 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 MYH13Q9UKX3 1938 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 USP17L3A6NCW0 530 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 USP17L4A6NCW7 530 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 LRRC10BA6NIK2 292 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 USP17L1Q7RTZ2 530 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 KIAA1328Q86T90 577 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 GSPT2Q8IYD1 628 aaKnown RBP21.68■■□□□ 1.06
CAPN1-226ENST00000533820 OR8K1Q8NGG5 319 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 CRNKL1Q9BZJ0 848 aaKnown RBP21.68■■□□□ 1.06
CAPN1-226ENST00000533820 CICQ96RK0 1608 aaPredicted RBP21.68■■□□□ 1.06
CAPN1-226ENST00000533820 DTHD1Q6ZMT9 781 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 PACS2Q86VP3 889 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 GOLGA6L1Q8N7Z2 621 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 MB21D1Q8N884 522 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 MSANTD4Q8NCY6 345 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 LRRIQ3A6PVS8 624 aaPredicted RBP21.67■■□□□ 1.06
CAPN1-226ENST00000533820 NKRFO15226 690 aaKnown RBP eCLIP21.67■■□□□ 1.06
CAPN1-226ENST00000533820 MRPS25P82663 173 aaKnown RBP21.67■■□□□ 1.06
CAPN1-226ENST00000533820 NAALADL2Q58DX5 795 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 MUM1L1Q5H9M0 696 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 RCSD1Q6JBY9 416 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 SLC44A5Q8NCS7 719 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 DISC1Q9NRI5 854 aa21.67■■□□□ 1.06
CAPN1-226ENST00000533820 MACROD2A1Z1Q3 448 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 KCNQ2O43526 872 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 CCDC178Q5BJE1 867 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 MMS19Q96T76 1030 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 RMND1Q9NWS8 449 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 RAB21Q9UL25 225 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 STX8Q9UNK0 236 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.66■■□□□ 1.06
CAPN1-226ENST00000533820 BCORQ6W2J9 1755 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 TRIM21P19474 475 aaKnown RBP21.66■■□□□ 1.06
CAPN1-226ENST00000533820 PIP4K2BP78356 416 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 TXNRD3Q86VQ6 643 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 PLEKHA4Q9H4M7 779 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 ZNF185O15231 689 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 UBE4AQ14139 1066 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 WHAMMP3Q1A5X7 153 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 TTC31Q49AM3 519 aaPredicted RBP21.66■■□□□ 1.06
CAPN1-226ENST00000533820 ADSSL1Q8N142 457 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 PNMA1Q8ND90 353 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 LRRC15Q8TF66 581 aa21.66■■□□□ 1.06
CAPN1-226ENST00000533820 MAGEC2Q9UBF1 373 aaPredicted RBP21.66■■□□□ 1.06
CAPN1-226ENST00000533820 HERVK_113P62684 666 aa21.65■■□□□ 1.06
CAPN1-226ENST00000533820 HSP90B2PQ58FF3 399 aa21.65■■□□□ 1.06
CAPN1-226ENST00000533820 SRLQ86TD4 932 aa21.65■■□□□ 1.06
CAPN1-226ENST00000533820 C4orf32Q8N8J7 132 aa21.65■■□□□ 1.06
CAPN1-226ENST00000533820 DUOX1Q9NRD9 1551 aa21.65■■□□□ 1.06
CAPN1-226ENST00000533820 RCCD1A6NED2 376 aa21.65■■□□□ 1.06
CAPN1-226ENST00000533820 WDR59Q6PJI9 974 aa21.65■■□□□ 1.06
CAPN1-226ENST00000533820 LACRTQ9GZZ8 138 aa21.65■■□□□ 1.06
CAPN1-226ENST00000533820 LRP5O75197 1615 aa21.64■■□□□ 1.06
CAPN1-226ENST00000533820 ANKRD65E5RJM6 399 aa21.64■■□□□ 1.06
CAPN1-226ENST00000533820 H7C1D1 291 aa21.64■■□□□ 1.06
CAPN1-226ENST00000533820 FOXR1Q6PIV2 292 aa21.64■■□□□ 1.06
CAPN1-226ENST00000533820 CSGALNACT2Q8N6G5 542 aa21.64■■□□□ 1.06
CAPN1-226ENST00000533820 POTEB2H3BUK9 544 aa21.64■■□□□ 1.05
CAPN1-226ENST00000533820 EIF3JO75822 258 aaKnown RBP21.64■■□□□ 1.05
CAPN1-226ENST00000533820 AMPD2Q01433 879 aa21.64■■□□□ 1.05
CAPN1-226ENST00000533820 DDB1Q16531 1140 aa21.64■■□□□ 1.05
CAPN1-226ENST00000533820 CAGE1Q8TC20 777 aa21.64■■□□□ 1.05
CAPN1-226ENST00000533820 RIN2Q8WYP3 895 aaPredicted RBP21.64■■□□□ 1.05
CAPN1-226ENST00000533820 DEF6Q9H4E7 631 aa21.64■■□□□ 1.05
CAPN1-226ENST00000533820 VAT1LQ9HCJ6 419 aa21.64■■□□□ 1.05
CAPN1-226ENST00000533820 KIF5BP33176 963 aa21.64■■□□□ 1.05
CAPN1-226ENST00000533820 LONP1P36776 959 aaKnown RBP21.64■■□□□ 1.05
CAPN1-226ENST00000533820 HNRNPLLQ8WVV9 542 aaKnown RBP21.64■■□□□ 1.05
CAPN1-226ENST00000533820 EXOC4Q96A65 974 aa21.64■■□□□ 1.05
CAPN1-226ENST00000533820 IL17RBQ9NRM6 502 aa21.64■■□□□ 1.05
CAPN1-226ENST00000533820 LGALS16A8MUM7 142 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 USP5P45974 858 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 CCDC148Q8NFR7 591 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 SMCR8Q8TEV9 937 aaPredicted RBP21.63■■□□□ 1.05
CAPN1-226ENST00000533820 PSMB7Q99436 277 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 MKNK2Q9HBH9 465 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 BSDC1Q9NW68 430 aaPredicted RBP21.63■■□□□ 1.05
CAPN1-226ENST00000533820 PSMA7O14818 248 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 FECHP22830 423 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 TRAPPC10P48553 1259 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 TBC1D8BQ0IIM8 1120 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 KRT26Q7Z3Y9 468 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 DZIP1Q86YF9 867 aaKnown RBP21.63■■□□□ 1.05
CAPN1-226ENST00000533820 CXorf56Q9H5V9 222 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 SAP30BPQ9UHR5 308 aaKnown RBP21.63■■□□□ 1.05
CAPN1-226ENST00000533820 PCDHA4Q9UN74 947 aa21.63■■□□□ 1.05
CAPN1-226ENST00000533820 FCER1AP12319 257 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 HIBADHP31937 336 aaKnown RBP21.62■■□□□ 1.05
CAPN1-226ENST00000533820 LETM2Q2VYF4 491 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 TUBGCP2Q9BSJ2 902 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 JADE2Q9NQC1 790 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 CALML3P27482 149 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 TRIM14Q14142 442 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 SLC35G1Q2M3R5 365 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 EGFL6Q8IUX8 553 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 JAKMIP2Q96AA8 810 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 SAR1BQ9Y6B6 198 aa21.62■■□□□ 1.05
CAPN1-226ENST00000533820 ARAP2Q8WZ64 1704 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms