RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 RHPN1Q8TCX5 695 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 HERVK_113Q902F9 699 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 HIPK3Q9H422 1215 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 RAVER2Q9HCJ3 691 aaKnown RBP11.11□□□□□ -0.63
PACS1-214ENST00000533811 ISY1Q9ULR0 285 aaKnown RBP11.11□□□□□ -0.63
PACS1-214ENST00000533811 SLC4A4Q9Y6R1 1079 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 UMODL1Q5DID0 1318 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 DNAJC25-GNG10A0A024R161 153 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 RLBP1P12271 317 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 MYOGP15173 224 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 ADD2P35612 726 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 GJA9P57773 515 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 TFF2Q03403 129 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 HSP90AB4PQ58FF6 505 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 CXCL17Q6UXB2 119 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 CLASRPQ8N2M8 674 aaKnown RBP11.1□□□□□ -0.63
PACS1-214ENST00000533811 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.1□□□□□ -0.63
PACS1-214ENST00000533811 UPF3AQ9H1J1 476 aaKnown RBP11.1□□□□□ -0.63
PACS1-214ENST00000533811 BOLA2Q9H3K6 86 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 ABHD16BQ9H3Z7 469 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 HOMER2Q9NSB8 354 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 PAG1Q9NWQ8 432 aa11.1□□□□□ -0.63
PACS1-214ENST00000533811 GREB1LQ9C091 1923 aaPredicted RBP11.09□□□□□ -0.63
PACS1-214ENST00000533811 PRRC2BQ5JSZ5 2229 aaKnown RBP11.09□□□□□ -0.63
PACS1-214ENST00000533811 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.09□□□□□ -0.63
PACS1-214ENST00000533811 NDUFB10O96000 172 aa11.09□□□□□ -0.63
PACS1-214ENST00000533811 CHGBP05060 677 aa11.09□□□□□ -0.63
PACS1-214ENST00000533811 KCNQ1P51787 676 aa11.09□□□□□ -0.63
PACS1-214ENST00000533811 DIEXFQ68CQ4 756 aaKnown RBP11.09□□□□□ -0.63
PACS1-214ENST00000533811 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
PACS1-214ENST00000533811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
PACS1-214ENST00000533811 C1QTNF1Q9BXJ1 281 aa11.09□□□□□ -0.63
PACS1-214ENST00000533811 SLC4A7Q9Y6M7 1214 aa11.09□□□□□ -0.63
PACS1-214ENST00000533811 F5H6K3 240 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 CD4P01730 458 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 TNFAIP2Q03169 654 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 KLRC3Q07444 240 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 CTR9Q6PD62 1173 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 CCDC144CPQ8IYA2 1237 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 PRPF38AQ8NAV1 312 aaKnown RBP11.08□□□□□ -0.64
PACS1-214ENST00000533811 KIF1BPQ96EK5 621 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 FGD4Q96M96 766 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 AP5M1Q9H0R1 490 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 CERS4Q9HA82 394 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 MKNK2Q9HBH9 465 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 FBXO40Q9UH90 709 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 SCN5AQ14524 2016 aa11.08□□□□□ -0.64
PACS1-214ENST00000533811 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 RFXAPO00287 272 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 CTAGE5O15320 804 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
PACS1-214ENST00000533811 PTGS1P23219 599 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 CNTN2Q02246 1040 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 ITGA7Q13683 1181 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 FSCN1Q16658 493 aaKnown RBP11.07□□□□□ -0.64
PACS1-214ENST00000533811 AAK1Q2M2I8 961 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 TLK2Q86UE8 772 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 RPUSD2Q8IZ73 545 aaKnown RBP11.07□□□□□ -0.64
PACS1-214ENST00000533811 CHST13Q8NET6 341 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 CHMP4CQ96CF2 233 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 SCLYQ96I15 445 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 NOC4LQ9BVI4 516 aaKnown RBP11.07□□□□□ -0.64
PACS1-214ENST00000533811 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.07□□□□□ -0.64
PACS1-214ENST00000533811 TRPV6Q9H1D0 765 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 ARPP21Q9UBL0 812 aaPredicted RBP11.07□□□□□ -0.64
PACS1-214ENST00000533811 CLIP2Q9UDT6 1046 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 HCN4Q9Y3Q4 1203 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 ASTN1O14525 1302 aa11.07□□□□□ -0.64
PACS1-214ENST00000533811 LRRC37A2A6NM11 1700 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 ATP2A1O14983 1001 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 DYNC1LI2O43237 492 aaPredicted RBP11.06□□□□□ -0.64
PACS1-214ENST00000533811 ZEB2O60315 1214 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 B4GALT4O60513 344 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 CABYRO75952 493 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 BMP1P13497 986 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 ATP2A2P16615 1042 aaKnown RBP11.06□□□□□ -0.64
PACS1-214ENST00000533811 RASA1P20936 1047 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 PSMC6P62333 389 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 IKQ13123 557 aaPredicted RBP11.06□□□□□ -0.64
PACS1-214ENST00000533811 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 LRRC47Q8N1G4 583 aaKnown RBP11.06□□□□□ -0.64
PACS1-214ENST00000533811 PANK1Q8TE04 598 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 WNT8AQ9H1J5 351 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 SLC38A10Q9HBR0 1119 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 NYAP2Q9P242 653 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 FEM1BQ9UK73 627 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 PCDHA11Q9Y5I1 949 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 DDX49Q9Y6V7 483 aaKnown RBP11.06□□□□□ -0.64
PACS1-214ENST00000533811 ZBED9Q6R2W3 1325 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 CHD9Q3L8U1 2897 aa11.06□□□□□ -0.64
PACS1-214ENST00000533811 BDP1A6H8Y1 2624 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 UBE3CQ15386 1083 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 TMEM67Q5HYA8 995 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 DEFB128Q7Z7B8 93 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 SLC43A3Q8NBI5 491 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 LRFN3Q9BTN0 628 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 KATNBL1Q9H079 304 aa11.05□□□□□ -0.64
PACS1-214ENST00000533811 PUS7LQ9H0K6 701 aaKnown RBP11.05□□□□□ -0.64
PACS1-214ENST00000533811 EPHX3Q9H6B9 360 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms