RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 SPRYD7Q5W111 196 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 IL17RBQ9NRM6 502 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 NYAP2Q9P242 653 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 ORC3Q9UBD5 711 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 AFG3L2Q9Y4W6 797 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 C19orf81C9J6K1 198 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 USP17L10C9JJH3 530 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 CXCL11O14625 94 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 IRF6O14896 467 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 NMT2O60551 498 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 DEXIO95424 95 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 ZSCAN22P10073 491 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 EEF2P13639 858 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 ATP2B2Q01814 1243 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 DDX11Q96FC9 970 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 FEZ1Q99689 392 aa12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-218ENST00000533761 TRIM75PA6NK02 468 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 JAK2O60674 1132 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 ADD1P35611 737 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 NOVP48745 357 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 GTF2A2P52657 109 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 BACE1P56817 501 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 SNAPC2Q13487 334 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 RASAL3Q86YV0 1011 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 CCDC144CPQ8IYA2 1237 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 MKL1Q969V6 931 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 C8orf76Q96K31 380 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 MYL10Q9BUA6 226 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 KIAA1683Q9H0B3 1180 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 ZSCAN16Q9H4T2 348 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 CLIP2Q9UDT6 1046 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 SLC10A3P09131 477 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 RXRAP19793 462 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 USP14P54578 494 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 NOGQ13253 232 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 GRM1Q13255 1194 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 MTMR2Q13614 643 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 CLEC17AQ6ZS10 378 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 SIAH1Q8IUQ4 282 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 NKX2-3Q8TAU0 364 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 SLC26A6Q9BXS9 759 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 SENP2Q9HC62 589 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 GOPCQ9HD26 462 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 KCNH4Q9UQ05 1017 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 TMX2Q9Y320 296 aa12.64□□□□□ -0.39
CCDC90B-218ENST00000533761 GREB1LQ9C091 1923 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 FAM155AB1AL88 458 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 CETPP11597 493 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 SMARCA1P28370 1054 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 INHBEP58166 350 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 GRM4Q14833 912 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 SAFBQ15424 915 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 ASPRV1Q53RT3 343 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 GPATCH4Q5T3I0 446 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 CYP4F22Q6NT55 531 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 TMTC3Q6ZXV5 915 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 FASTKD5Q7L8L6 764 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 RAB11FIP4Q86YS3 637 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 FAM177A1Q8N128 213 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 ZNF516Q92618 1163 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 DDX27Q96GQ7 796 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 CAPNS2Q96L46 248 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 EPAS1Q99814 870 aa12.63□□□□□ -0.39
CCDC90B-218ENST00000533761 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 MANSC4A6NHS7 340 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 DGAT1O75907 488 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 F13A1P00488 732 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 CDC27P30260 824 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 GJA5P36382 358 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 GGCXP38435 758 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 HTRA3P83110 453 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 GNL2Q13823 731 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 NTRK3Q16288 839 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 LPAR1Q92633 364 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 ALG1Q9BT22 464 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 BRMS1Q9HCU9 246 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
CCDC90B-218ENST00000533761 A0A0G2JLL6 359 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 F5H6K3 240 aa12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 PRPF3O43395 683 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 HMGCS2P54868 508 aa12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 KLRC3Q07444 240 aa12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 SH3D19Q5HYK7 790 aa12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 PRRT2Q7Z6L0 340 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 GMCL1P1Q8NEA9 526 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms