RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 VPS37BQ9H9H4 285 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 TBC1D7Q9P0N9 293 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 PALD1Q9ULE6 856 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 USTQ9Y2C2 406 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 ATP7BP35670 1465 aa7.7□□□□□ -1.18
CTNND1-236ENST00000533667 TMEM2Q9UHN6 1383 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 KCNK3O14649 394 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PRPF6O94906 941 aaKnown RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 TBC1D8O95759 1140 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PHKG2P15735 406 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 ATP2B4P23634 1241 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PNMA1Q8ND90 353 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 FAM81BQ96LP2 452 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 CAPS2Q9BXY5 557 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 TRIM6Q9C030 488 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PSTPIP2Q9H939 334 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PANK4Q9NVE7 773 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 FANCLQ9NW38 375 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 LARSQ9P2J5 1176 aaKnown RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 ZNF215Q9UL58 517 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 CLEC11AQ9Y240 323 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PHLPP2Q6ZVD8 1323 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 H0YIN7 160 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 FGAP02671 866 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 SLC8A1P32418 973 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 IRX1P78414 480 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 ZMYM1Q5SVZ6 1142 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 IL17REQ8NFR9 667 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 CARD10Q9BWT7 1032 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 BIN2Q9UBW5 565 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 IVNS1ABPQ9Y6Y0 642 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 NEO1Q92859 1461 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 SAMD9Q5K651 1589 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 TNNI1P19237 187 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 COPB1P53618 953 aaKnown RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 LMNB2Q03252 620 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 ARHGAP44Q17R89 818 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 FAM26FQ5R3K3 315 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 MCF2L2Q86YR7 1114 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 TPH2Q8IWU9 490 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 DEPTORQ8TB45 409 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 RSAD2Q8WXG1 361 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 STAMQ92783 540 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PLEKHF1Q96S99 279 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PSMB7Q99436 277 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 C1orf112Q9NSG2 853 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 ATG3Q9NT62 314 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 EIF3CLB5ME19 914 aaKnown RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 POLR2BP30876 1174 aaKnown RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 CA8P35219 290 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 NDUFA8P51970 172 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 BPIFB4P59827 614 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 FAM47AQ5JRC9 791 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PDZD4Q76G19 769 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PPP4R1Q8TF05 950 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 WHAMMQ8TF30 809 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 EIF3CQ99613 913 aaKnown RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 AS3MTQ9HBK9 375 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 GPHNQ9NQX3 736 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-236ENST00000533667 STK32BQ9NY57 414 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 DNAJC5BQ9UF47 199 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 SATB2Q9UPW6 733 aa7.69□□□□□ -1.18
CTNND1-236ENST00000533667 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-236ENST00000533667 SH3BP5O60239 455 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 LMNB1P20700 586 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 ADD1P35611 737 aaKnown RBP7.68□□□□□ -1.18
CTNND1-236ENST00000533667 PDE6CP51160 858 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 SLC12A2P55011 1212 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 TNFAIP1Q13829 316 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 LRRC23Q53EV4 343 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-236ENST00000533667 PALM2Q8IXS6 379 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 KRT12Q99456 494 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 PPANQ9NQ55 473 aaKnown RBP7.68□□□□□ -1.18
CTNND1-236ENST00000533667 MLH3Q9UHC1 1453 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 PASKQ96RG2 1323 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 KLRF2D3W0D1 207 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 SCRN1Q12765 414 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 USH1GQ495M9 461 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 ZBTB8OSQ8IWT0 167 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 TRIM11Q96F44 468 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 PFDN4Q9NQP4 134 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 FAM114A2Q9NRY5 505 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 JRKLQ9Y4A0 524 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 NDUFB9Q9Y6M9 179 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 CFAP74Q9C0B2 1584 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 ABCC12Q96J65 1359 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 BTBD18B2RXH4 712 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 FMNL1O95466 1100 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-236ENST00000533667 POLR2MP0CAP2 368 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 ABCD1P33897 745 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 TECP42680 631 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 NSMFQ6X4W1 530 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-236ENST00000533667 SH3GL3Q99963 347 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 PPP1R12CQ9BZL4 782 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 USP40Q9NVE5 1235 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 DDX25Q9UHL0 483 aaKnown RBP7.68□□□□□ -1.18
CTNND1-236ENST00000533667 FAN1Q9Y2M0 1017 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 PLEKHG1Q9ULL1 1385 aa7.68□□□□□ -1.18
CTNND1-236ENST00000533667 THAP12O43422 761 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms