RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, human

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD9-208	ENST00000533643	RBPJL	Q9UBG7	517 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	ADGRA2	Q96PE1	1338 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	PPP1R11	O60927	126 aa	Predicted RBP	13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	GCLC	P48506	637 aa	Predicted RBP	13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	AKAP17A	Q02040	695 aa	Known RBP	13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	TMEM132B	Q14DG7	1078 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	TAF1C	Q15572	869 aa	Predicted RBP	13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	PKN1	Q16512	942 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	CCDC174	Q6PII3	467 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	TRIM22	Q8IYM9	498 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	DDX11	Q96FC9	970 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	INTS4	Q96HW7	963 aa	Known RBP	13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	RAVER2	Q9HCJ3	691 aa	Known RBP	13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	TXNRD2	Q9NNW7	524 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	FOXD4L1	Q9NU39	408 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	RABGAP1	Q9Y3P9	1069 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	ZNF536	O15090	1300 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	STK36	Q9NRP7	1315 aa		13.79	□□□□□ -0.2
COMMD9-208	ENST00000533643	ATP2A1	O14983	1001 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	CA12	O43570	354 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	ALDH1A1	P00352	501 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	ICAM1	P05362	532 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	TAL1	P17542	331 aa	Predicted RBP	13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	SLC4A3	P48751	1232 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	CRHR2	Q13324	411 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	PFKFB3	Q16875	520 aa	Predicted RBP	13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	FBXO11	Q86XK2	927 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	AGBL1	Q96MI9	1066 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	PAGR1	Q9BTK6	254 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	R3HDML	Q9H3Y0	253 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	ZFYVE28	Q9HCC9	887 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	RBM27	Q9P2N5	1060 aa	Known RBP	13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	SEC63	Q9UGP8	760 aa	Known RBP	13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	THSD7B	Q9C0I4	1608 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	PARP14	Q460N5	1801 aa		13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.78	□□□□□ -0.2
COMMD9-208	ENST00000533643	DEXI	O95424	95 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	SCG2	P13521	617 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	OAZ1	P54368	228 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	HMGN5	P82970	282 aa	Known RBP	13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643		Q3C1V9	767 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	WWC2	Q6AWC2	1192 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	CPXCR1	Q8N123	301 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	ANKRD13C	Q8N6S4	541 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	SPRYD3	Q8NCJ5	442 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	AIFM3	Q96NN9	605 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	SPATC1L	Q9H0A9	340 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	RNF186	Q9NXI6	227 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	MORF4L1	Q9UBU8	362 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	CPA4	Q9UI42	421 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	ZNF214	Q9UL59	606 aa	Predicted RBP	13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	SMC3	Q9UQE7	1217 aa		13.77	□□□□□ -0.21
COMMD9-208	ENST00000533643	STXBP3	O00186	592 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	TLR2	O60603	784 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	TRPA1	O75762	1119 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	BCR	P11274	1271 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	GJB2	P29033	226 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	STAT3	P40763	770 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	ERVK-9	P63128	1117 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	ERVK-24	P63145	666 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	PLS1	Q14651	629 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	SNRNP48	Q6IEG0	339 aa	Known RBP	13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	C17orf99	Q6UX52	265 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	HEATR3	Q7Z4Q2	680 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	GPRC5A	Q8NFJ5	357 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	COA7	Q96BR5	231 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	SHISA4	Q96DD7	197 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	AMN	Q9BXJ7	453 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	CCPG1	Q9ULG6	757 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	RIPK3	Q9Y572	518 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	PCDHA1	Q9Y5I3	950 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643		A0A0G2JMZ2	1700 aa		13.76	□□□□□ -0.21
COMMD9-208	ENST00000533643	HSP90AA1	P07900	732 aa	Known RBP	13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	ALAS1	P13196	640 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	USH1G	Q495M9	461 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	TYW1B	Q6NUM6	668 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	RIOX2	Q8IUF8	465 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	WASF1	Q92558	559 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	ALG1	Q9BT22	464 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	CFHR5	Q9BXR6	569 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	TEX13B	Q9BXU2	312 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	BARHL2	Q9NY43	387 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	PNMA2	Q9UL42	364 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	CEP350	Q5VT06	3117 aa		13.75	□□□□□ -0.21
COMMD9-208	ENST00000533643	ABCB11	O95342	1321 aa		13.74	□□□□□ -0.21
COMMD9-208	ENST00000533643	hCG_1984214	I3L0E3	225 aa		13.74	□□□□□ -0.21
COMMD9-208	ENST00000533643	TBC1D8	O95759	1140 aa		13.74	□□□□□ -0.21
COMMD9-208	ENST00000533643	TRAF1	Q13077	416 aa		13.74	□□□□□ -0.21
COMMD9-208	ENST00000533643	FAM110C	Q1W6H9	321 aa		13.74	□□□□□ -0.21
COMMD9-208	ENST00000533643	TKFC	Q3LXA3	575 aa		13.74	□□□□□ -0.21
COMMD9-208	ENST00000533643	ZNF713	Q8N859	430 aa	Predicted RBP	13.74	□□□□□ -0.21
COMMD9-208	ENST00000533643	FAM184A	Q8NB25	1140 aa		13.74	□□□□□ -0.21
COMMD9-208	ENST00000533643	CLEC4D	Q8WXI8	215 aa		13.74	□□□□□ -0.21
COMMD9-208	ENST00000533643	TRERF1	Q96PN7	1200 aa		13.74	□□□□□ -0.21

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