RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 MMS19Q96T76 1030 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 NUP58Q9BVL2 599 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 CCSER1Q9C0I3 900 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 KBTBD4Q9NVX7 518 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 MAGEC2Q9UBF1 373 aaPredicted RBP18.64■□□□□ 0.57
CTSB-228ENST00000533455 NIP7Q9Y221 180 aaKnown RBP eCLIP18.64■□□□□ 0.571e-6■■■■□ 21.2
CTSB-228ENST00000533455 RRP15Q9Y3B9 282 aaKnown RBP18.64■□□□□ 0.57
CTSB-228ENST00000533455 CCDC88AQ3V6T2 1871 aa18.63■□□□□ 0.57
CTSB-228ENST00000533455 M0R2N6 131 aa18.63■□□□□ 0.57
CTSB-228ENST00000533455 CYLC1P35663 651 aaPredicted RBP18.63■□□□□ 0.57
CTSB-228ENST00000533455 CRKLP46109 303 aaKnown RBP18.63■□□□□ 0.57
CTSB-228ENST00000533455 CAVIN4Q5BKX8 364 aa18.63■□□□□ 0.57
CTSB-228ENST00000533455 JAKMIP2Q96AA8 810 aa18.63■□□□□ 0.57
CTSB-228ENST00000533455 TRIM47Q96LD4 638 aa18.63■□□□□ 0.57
CTSB-228ENST00000533455 HDAC6Q9UBN7 1215 aa18.63■□□□□ 0.57
CTSB-228ENST00000533455 MKRN1Q9UHC7 482 aaKnown RBP18.63■□□□□ 0.57
CTSB-228ENST00000533455 ROBO1Q9Y6N7 1651 aa18.63■□□□□ 0.57
CTSB-228ENST00000533455 TAF1P21675 1872 aa18.63■□□□□ 0.57
CTSB-228ENST00000533455 EIF3CLB5ME19 914 aaKnown RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 ENC1O14682 589 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 KRT86O43790 486 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 RCSD1Q6JBY9 416 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 DTHD1Q6ZMT9 781 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 CCDC170Q8IYT3 715 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 DAGLBQ8NCG7 672 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 NSUN4Q96CB9 384 aaKnown RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 DHTKD1Q96HY7 919 aaPredicted RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 PURBQ96QR8 312 aaKnown RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 EIF3CQ99613 913 aaKnown RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 CRNKL1Q9BZJ0 848 aaKnown RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 RASSF4Q9H2L5 321 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 DCP1AQ9NPI6 582 aaPredicted RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 ATP8A2Q9NTI2 1148 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 ARPP21Q9UBL0 812 aaPredicted RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 LCMT1Q9UIC8 334 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 HPCAL4Q9UM19 191 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 ZC3H4Q9UPT8 1303 aaKnown RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 PRPF6O94906 941 aaKnown RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 NT5C2P49902 561 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 FAM47AQ5JRC9 791 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 KIAA1328Q86T90 577 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 ANKRD18AQ8IVF6 992 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 FAM84BQ96KN1 310 aaPredicted RBP18.62■□□□□ 0.57
CTSB-228ENST00000533455 MAGEF1Q9HAY2 307 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 EXOC1Q9NV70 894 aa18.62■□□□□ 0.57
CTSB-228ENST00000533455 EXOC5O00471 708 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 SYF2O95926 243 aaKnown RBP18.61■□□□□ 0.57
CTSB-228ENST00000533455 CDK17Q00537 523 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 EVX2Q03828 476 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 DUSP9Q99956 384 aaKnown RBP18.61■□□□□ 0.57
CTSB-228ENST00000533455 CUEDC2Q9H467 287 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 FAM204AQ9H8W3 233 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 BSDC1Q9NW68 430 aaPredicted RBP18.61■□□□□ 0.57
CTSB-228ENST00000533455 LAD1O00515 517 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 RNF40O75150 1001 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 PRPHP41219 470 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 ZBED6P86452 979 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 FIGNQ5HY92 759 aa18.61■□□□□ 0.57
CTSB-228ENST00000533455 RASSF10A6NK89 507 aa18.6■□□□□ 0.57
CTSB-228ENST00000533455 B4DLN1 442 aa18.6■□□□□ 0.57
CTSB-228ENST00000533455 SF3B3Q15393 1217 aaKnown RBP18.6■□□□□ 0.57
CTSB-228ENST00000533455 GALNT17Q6IS24 598 aa18.6■□□□□ 0.57
CTSB-228ENST00000533455 FBXO33Q7Z6M2 555 aa18.6■□□□□ 0.57
CTSB-228ENST00000533455 COG1Q8WTW3 980 aa18.6■□□□□ 0.57
CTSB-228ENST00000533455 ANKS1AQ92625 1134 aa18.6■□□□□ 0.57
CTSB-228ENST00000533455 TUBGCP2Q9BSJ2 902 aa18.6■□□□□ 0.57
CTSB-228ENST00000533455 TMEM60Q9H2L4 133 aa18.6■□□□□ 0.57
CTSB-228ENST00000533455 ZNHIT6Q9NWK9 470 aaKnown RBP18.6■□□□□ 0.57
CTSB-228ENST00000533455 CCDC194A0A1B0GVG4 234 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 A0A1W2PQJ5 194 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 TSPY2A6NKD2 308 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 CCNE1P24864 410 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 MECOMQ03112 1051 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 LRRC31Q6UY01 552 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 FAM114A1Q8IWE2 563 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 AFAP1L1Q8TED9 768 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 GPKOWQ92917 476 aaPredicted RBP eCLIP18.59■□□□□ 0.57
CTSB-228ENST00000533455 NHEJ1Q9H9Q4 299 aaPredicted RBP18.59■□□□□ 0.57
CTSB-228ENST00000533455 PCDHA6Q9UN73 950 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 PCDHA8Q9Y5H6 950 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 BICDL2A1A5D9 508 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 RCCD1A6NED2 376 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 WTIPA6NIX2 430 aaPredicted RBP18.59■□□□□ 0.57
CTSB-228ENST00000533455 PP2D1A8MPX8 630 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 SRGAP2O75044 1071 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 UBA7P41226 1012 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 PPP1R2P41236 205 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 GRM4Q14833 912 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 DGKHQ86XP1 1220 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 CSGALNACT2Q8N6G5 542 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 P2RX5Q93086 422 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 IQCDQ96DY2 449 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 LACRTQ9GZZ8 138 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 KAT14Q9H8E8 782 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 AGPAT5Q9NUQ2 364 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 TFR2Q9UP52 801 aa18.59■□□□□ 0.57
CTSB-228ENST00000533455 FLT1P17948 1338 aa18.58■□□□□ 0.57
CTSB-228ENST00000533455 PES1O00541 588 aaKnown RBP18.58■□□□□ 0.56
CTSB-228ENST00000533455 PHACTR2O75167 634 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms