RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 FBXO40Q9UH90 709 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 STX8Q9UNK0 236 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 CTDP1Q9Y5B0 961 aaPredicted RBP13.39□□□□□ -0.27
CLCF1-202ENST00000533438 LCTP09848 1927 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 ZNF536O15090 1300 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 CCDC171Q6TFL3 1326 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 TRIM6-TRIM34B2RNG4 842 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 RANBP6O60518 1105 aaKnown RBP13.38□□□□□ -0.27
CLCF1-202ENST00000533438 SNAI1O95863 264 aaPredicted RBP13.38□□□□□ -0.27
CLCF1-202ENST00000533438 RARBP10826 455 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 AKR1A1P14550 325 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 MCCP23508 829 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 RTP1P59025 263 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 C1orf53Q5VUE5 145 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 RASGRP2Q7LDG7 609 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 CHURC1Q8WUH1 139 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 RILPL2Q969X0 211 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 XPNPEP3Q9NQH7 507 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 LRRC37A2A6NM11 1700 aa13.38□□□□□ -0.27
CLCF1-202ENST00000533438 SPTBN5Q9NRC6 3674 aaKnown RBP13.37□□□□□ -0.27
CLCF1-202ENST00000533438 SDSP20132 328 aa13.37□□□□□ -0.27
CLCF1-202ENST00000533438 ADCYAP1R1P41586 468 aa13.37□□□□□ -0.27
CLCF1-202ENST00000533438 SLC4A3P48751 1232 aa13.37□□□□□ -0.27
CLCF1-202ENST00000533438 RCSD1Q6JBY9 416 aa13.37□□□□□ -0.27
CLCF1-202ENST00000533438 KCTD1Q719H9 257 aa13.37□□□□□ -0.27
CLCF1-202ENST00000533438 TCP11L1Q9NUJ3 509 aa13.37□□□□□ -0.27
CLCF1-202ENST00000533438 PHF24Q9UPV7 400 aa13.37□□□□□ -0.27
CLCF1-202ENST00000533438 CNPY2Q9Y2B0 182 aa13.37□□□□□ -0.27
CLCF1-202ENST00000533438 VCANP13611 3396 aa13.37□□□□□ -0.27
CLCF1-202ENST00000533438 ADAMTS4O75173 837 aa13.36□□□□□ -0.27
CLCF1-202ENST00000533438 PGK1P00558 417 aa13.36□□□□□ -0.27
CLCF1-202ENST00000533438 MDM2Q00987 491 aaPredicted RBP13.36□□□□□ -0.27
CLCF1-202ENST00000533438 ANKRD35Q8N283 1001 aa13.36□□□□□ -0.27
CLCF1-202ENST00000533438 LENG1Q96BZ8 264 aaPredicted RBP13.36□□□□□ -0.27
CLCF1-202ENST00000533438 AGBL1Q96MI9 1066 aa13.36□□□□□ -0.27
CLCF1-202ENST00000533438 ACAD9Q9H845 621 aa13.36□□□□□ -0.27
CLCF1-202ENST00000533438 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
CLCF1-202ENST00000533438 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
CLCF1-202ENST00000533438 MFAP1P55081 439 aaKnown RBP13.35□□□□□ -0.27
CLCF1-202ENST00000533438 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
CLCF1-202ENST00000533438 TKFCQ3LXA3 575 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 TRIM60Q495X7 471 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 RNF180Q86T96 592 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 FAM133AQ8N9E0 248 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 FERMT2Q96AC1 680 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
CLCF1-202ENST00000533438 ABHD16BQ9H3Z7 469 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
CLCF1-202ENST00000533438 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 RNF146Q9NTX7 359 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.35□□□□□ -0.27
CLCF1-202ENST00000533438 FAM184BQ9ULE4 1060 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 PRR12Q9ULL5 1215 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 ISY1Q9ULR0 285 aaKnown RBP13.35□□□□□ -0.27
CLCF1-202ENST00000533438 SYNRGQ9UMZ2 1314 aa13.35□□□□□ -0.27
CLCF1-202ENST00000533438 EYSQ5T1H1 3165 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 A0A1W2PQ45 241 aaPredicted RBP13.34□□□□□ -0.27
CLCF1-202ENST00000533438 A0A1W2PQY0 241 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 ADCY6O43306 1168 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 TOP1P11387 765 aaKnown RBP13.34□□□□□ -0.27
CLCF1-202ENST00000533438 PCP11498 1178 aaKnown RBP13.34□□□□□ -0.27
CLCF1-202ENST00000533438 HAND2P61296 217 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 CNTN2Q02246 1040 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 ACVR2BQ13705 512 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
CLCF1-202ENST00000533438 AKNAD1Q5T1N1 836 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 CCSAPQ6IQ19 270 aaPredicted RBP13.34□□□□□ -0.27
CLCF1-202ENST00000533438 BTNL9Q6UXG8 535 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 CENPQQ7L2Z9 268 aaPredicted RBP13.34□□□□□ -0.27
CLCF1-202ENST00000533438 ARMCX2Q7L311 632 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 TBC1D10CQ8IV04 446 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 KLHDC9Q8NEP7 349 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 GUCD1Q96NT3 240 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 TRERF1Q96PN7 1200 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 TSEN34Q9BSV6 310 aaKnown RBP13.34□□□□□ -0.27
CLCF1-202ENST00000533438 KATNBL1Q9H079 304 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 PDLIM7Q9NR12 457 aa13.34□□□□□ -0.27
CLCF1-202ENST00000533438 ZHX1Q9UKY1 873 aaPredicted RBP13.34□□□□□ -0.27
CLCF1-202ENST00000533438 DUSP11O75319 330 aaKnown RBP13.33□□□□□ -0.28
CLCF1-202ENST00000533438 ALAS1P13196 640 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 CST5P28325 142 aaPredicted RBP13.33□□□□□ -0.28
CLCF1-202ENST00000533438 SNAP25P60880 206 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 MUM1L1Q5H9M0 696 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 TTBK2Q6IQ55 1244 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 CCDC174Q6PII3 467 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 MFSD6Q6ZSS7 791 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 LBHD1Q9BQE6 289 aaPredicted RBP13.33□□□□□ -0.28
CLCF1-202ENST00000533438 RANBP17Q9H2T7 1088 aaKnown RBP13.33□□□□□ -0.28
CLCF1-202ENST00000533438 PRKAG2Q9UGJ0 569 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 MTMR7Q9Y216 660 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 ASTN1O14525 1302 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 NEDD4P46934 1319 aa13.33□□□□□ -0.28
CLCF1-202ENST00000533438 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 MYADML2A6NDP7 307 aa13.32□□□□□ -0.28
CLCF1-202ENST00000533438 SOWAHBA6NEL2 793 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms