RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 FBXO11Q86XK2 927 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 IFNL1Q8IU54 200 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 FAM177A1Q8N128 213 aaPredicted RBP13.12□□□□□ -0.31
GMDS-210ENST00000533279 SRBD1Q8N5C6 995 aaKnown RBP13.12□□□□□ -0.31
GMDS-210ENST00000533279 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
GMDS-210ENST00000533279 PHKBQ93100 1093 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 DDX11Q96FC9 970 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 AMNQ9BXJ7 453 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 GLT8D2Q9H1C3 349 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 RIOX1Q9H6W3 641 aa13.12□□□□□ -0.31
GMDS-210ENST00000533279 V9GY48 417 aaPredicted RBP13.12□□□□□ -0.31
GMDS-210ENST00000533279 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
GMDS-210ENST00000533279 H3BQV1 296 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 VWA5AO00534 786 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 SCG2P13521 617 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 PPP1R18Q6NYC8 613 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 CMTR1Q8N1G2 835 aaKnown RBP13.11□□□□□ -0.31
GMDS-210ENST00000533279 CUL5Q93034 780 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 ATG4CQ96DT6 458 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 PIGSQ96S52 555 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 ALG1Q9BT22 464 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 PAGR1Q9BTK6 254 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 TEX13BQ9BXU2 312 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 RANBP17Q9H2T7 1088 aaKnown RBP13.11□□□□□ -0.31
GMDS-210ENST00000533279 JMJD4Q9H9V9 463 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 FBXO28Q9NVF7 368 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 RABGAP1Q9Y3P9 1069 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 ABCB11O95342 1321 aa13.11□□□□□ -0.31
GMDS-210ENST00000533279 ICAM1P05362 532 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 CALML3P27482 149 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 GJB2P29033 226 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 TM4SF4P48230 202 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 SLC4A3P48751 1232 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 VEGFBP49765 207 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 NAPAP54920 295 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
GMDS-210ENST00000533279 QRICH1Q2TAL8 776 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 SNRNP48Q6IEG0 339 aaKnown RBP13.1□□□□□ -0.31
GMDS-210ENST00000533279 LBX2Q6XYB7 198 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 BICD2Q8TD16 824 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 C8orf76Q96K31 380 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 IPO9Q96P70 1041 aaKnown RBP13.1□□□□□ -0.31
GMDS-210ENST00000533279 SLC38A10Q9HBR0 1119 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 FAM217BQ9NTX9 383 aaPredicted RBP13.1□□□□□ -0.31
GMDS-210ENST00000533279 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 FBXO40Q9UH90 709 aa13.1□□□□□ -0.31
GMDS-210ENST00000533279 MRPL11Q9Y3B7 192 aaKnown RBP13.1□□□□□ -0.31
GMDS-210ENST00000533279 JAK2O60674 1132 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 AOC2O75106 756 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 SLC25A27O95847 323 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 GNA11P29992 359 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 MAP2K1Q02750 393 aaPredicted RBP13.09□□□□□ -0.31
GMDS-210ENST00000533279 MOGSQ13724 837 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 NTRK3Q16288 839 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 USH1GQ495M9 461 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 MCF2L2Q86YR7 1114 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 TEX2Q8IWB9 1127 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 GPRC5AQ8NFJ5 357 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 SMARCC2Q8TAQ2 1214 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 P2RX7Q99572 595 aaKnown RBP13.09□□□□□ -0.31
GMDS-210ENST00000533279 CPVLQ9H3G5 476 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 C6orf50Q9HD87 102 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 SH3GLB2Q9NR46 395 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 PCDHA1Q9Y5I3 950 aa13.09□□□□□ -0.31
GMDS-210ENST00000533279 CA12O43570 354 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 CYP2C8P10632 490 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 ALAS1P13196 640 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 STAT3P40763 770 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 NLRP5P59047 1200 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 KIF22Q14807 665 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 FAM110CQ1W6H9 321 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 WDR78Q5VTH9 848 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 LARP1BQ659C4 914 aaKnown RBP13.08□□□□□ -0.32
GMDS-210ENST00000533279 MCTP2Q6DN12 878 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 GALNT17Q6IS24 598 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 MTMR8Q96EF0 704 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 EHMT1Q9H9B1 1298 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 RAVER2Q9HCJ3 691 aaKnown RBP13.08□□□□□ -0.32
GMDS-210ENST00000533279 BARHL2Q9NY43 387 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 IVNS1ABPQ9Y6Y0 642 aa13.08□□□□□ -0.32
GMDS-210ENST00000533279 IGF2BP3O00425 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
GMDS-210ENST00000533279 ATP2A1O14983 1001 aa13.07□□□□□ -0.32
GMDS-210ENST00000533279 CYTH3O43739 400 aa13.07□□□□□ -0.32
GMDS-210ENST00000533279 PPFIA3O75145 1194 aa13.07□□□□□ -0.32
GMDS-210ENST00000533279 CTDNEP1O95476 244 aa13.07□□□□□ -0.32
GMDS-210ENST00000533279 ADCY7P51828 1080 aa13.07□□□□□ -0.32
GMDS-210ENST00000533279 MRPL12P52815 198 aaKnown RBP13.07□□□□□ -0.32
GMDS-210ENST00000533279 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
GMDS-210ENST00000533279 ERVK-24P63145 666 aa13.07□□□□□ -0.32
GMDS-210ENST00000533279 FUT2Q10981 343 aa13.07□□□□□ -0.32
GMDS-210ENST00000533279 ARHGEF6Q15052 776 aa13.07□□□□□ -0.32
GMDS-210ENST00000533279 NCAPG2Q86XI2 1143 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms