RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 C8orf34Q49A92 452 aa15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 ZNF467Q7Z7K2 595 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 NCOA7Q8NI08 942 aa15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 PAWRQ96IZ0 340 aaKnown RBP15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 TINF2Q9BSI4 451 aa15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 USP26Q9BXU7 913 aa15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 ZSWIM5Q9P217 1185 aa15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 DDX20Q9UHI6 824 aaKnown RBP15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 PNMA2Q9UL42 364 aa15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 TAF6LQ9Y6J9 622 aa15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 COL11A1P12107 1806 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 SEPT4O43236 478 aa15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 PGK2P07205 417 aa15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 ZNF543Q08ER8 600 aa15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 GPATCH4Q5T3I0 446 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 MAMDC4Q6UXC1 1216 aa15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 TRPV1Q8NER1 839 aa15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 DDX11Q96FC9 970 aa15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 ZSCAN10Q96SZ4 725 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 RANBP17Q9H2T7 1088 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-212ENST00000533058 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 COL6A1P12109 1028 aa15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 HSPA4P34932 840 aa15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 KRT32Q14532 448 aa15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 CCDC96Q2M329 555 aa15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 STOX1Q6ZVD7 989 aa15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 ZKSCAN3Q9BRR0 538 aa15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 ACAD9Q9H845 621 aa15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 UPF2Q9HAU5 1272 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 LAMA4Q16363 1823 aa15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 SYNGAP1Q96PV0 1343 aa15.14■□□□□ 0.01
TRAPPC4-212ENST00000533058 ERICH2A1L162 156 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 SEC24BO95487 1268 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 ICAM1P05362 532 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 SYDE2Q5VT97 1194 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 TTBK2Q6IQ55 1244 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 RASGRP2Q7LDG7 609 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 ANKRD35Q8N283 1001 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 ENAHQ8N8S7 591 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 PNMA1Q8ND90 353 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 DIS3LQ8TF46 1054 aaKnown RBP15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 DPF3Q92784 378 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 AGBL1Q96MI9 1066 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 C11orf49Q9H6J7 331 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 KAT14Q9H8E8 782 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 MTMR7Q9Y216 660 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 NR2E3Q9Y5X4 410 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 TNKSO95271 1327 aa15.13■□□□□ 0.01
TRAPPC4-212ENST00000533058 CNGA1P29973 690 aa15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 SART3Q15020 963 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 CYB5R4Q7L1T6 521 aa15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 JAKMIP1Q96N16 626 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 TRERF1Q96PN7 1200 aa15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 MAF1Q9H063 256 aa15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 RNF146Q9NTX7 359 aa15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 CNPY2Q9Y2B0 182 aa15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 SNX14Q9Y5W7 946 aa15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 PFASO15067 1338 aa15.12■□□□□ 0.01
TRAPPC4-212ENST00000533058 IFIT3O14879 490 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 ZNF865P0CJ78 1059 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 PSMA5P28066 241 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 SLC16A2P36021 539 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 SLC4A3P48751 1232 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 SEC23AQ15436 765 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 ASPRV1Q53RT3 343 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 CHST3Q7LGC8 479 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 FAM133AQ8N9E0 248 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 ARRDC4Q8NCT1 418 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 CHMP4CQ96CF2 233 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 NEK1Q96PY6 1258 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 GPCPD1Q9NPB8 672 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 A1CFQ9NQ94 594 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 CCPG1Q9ULG6 757 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 FRMPD2Q68DX3 1309 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 WDR19Q8NEZ3 1342 aa15.11■□□□□ 0.01
TRAPPC4-212ENST00000533058 ZNFX1Q9P2E3 1918 aaKnown RBP15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 DNM1LO00429 736 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 PRC1O43663 620 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 SNAI1O95863 264 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 ALAS1P13196 640 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 MCM5P33992 734 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 ADCK5Q3MIX3 580 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 TSGA10IPQ3SY00 556 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 TMEM67Q5HYA8 995 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 PRAMEF19Q5SWL8 479 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 CCDC174Q6PII3 467 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 MB21D2Q8IYB1 491 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 FGD4Q96M96 766 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 MTA3Q9BTC8 594 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 HOMER2Q9NSB8 354 aa15.1■□□□□ 0.01
TRAPPC4-212ENST00000533058 LOC102724159A0A0B4J2E5 919 aa15.09■□□□□ 0.01
TRAPPC4-212ENST00000533058 H0YGN5 161 aa15.09■□□□□ 0.01
TRAPPC4-212ENST00000533058 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
TRAPPC4-212ENST00000533058 EVI5O60447 810 aa15.09■□□□□ 0.01
TRAPPC4-212ENST00000533058 HMGB1P09429 215 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-212ENST00000533058 AKR1A1P14550 325 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms