RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 CCDC175P0C221 793 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 ATP2B4P23634 1241 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 SMARCA1P28370 1054 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 CASQ1P31415 396 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 STAT6P42226 847 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 GNG11P61952 73 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 ERVK-24P63145 666 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 SEMA3FQ13275 785 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 FILIP1LQ4L180 1135 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 DTHD1Q6ZMT9 781 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 HEATR3Q7Z4Q2 680 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 CNGA4Q8IV77 575 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 GTPBP4Q9BZE4 634 aaKnown RBP9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 SAP30BPQ9UHR5 308 aaKnown RBP9.36□□□□□ -0.91
TRIM53BP-201ENST00000532912 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 KCNJ18B7U540 433 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 KLRF2D3W0D1 207 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 RHOBTB3O94955 611 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 GOLGA8HP0CJ92 632 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 GYS1P13807 737 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 TXLNAP40222 546 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 CCT6AP40227 531 aaKnown RBP9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 PMS1P54277 932 aaKnown RBP9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 KCNJ12Q14500 433 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 PPFIBP1Q86W92 1011 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 AMOTL1Q8IY63 956 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 ZNF507Q8TCN5 953 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 EYA3Q99504 573 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 IRX2Q9BZI1 471 aaPredicted RBP9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 CPVLQ9H3G5 476 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 PLSCR2Q9NRY7 297 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 ABHD10Q9NUJ1 306 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 USP21Q9UK80 565 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 STX8Q9UNK0 236 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 FHOD1Q9Y613 1164 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 MYH8P13535 1937 aa9.35□□□□□ -0.91
TRIM53BP-201ENST00000532912 C10orf71Q711Q0 1435 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 ESYT2A0FGR8 921 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 TRIM49BA6NDI0 452 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 H7C1D1 291 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 N4BP3O15049 544 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 NPHP1O15259 732 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 EDIL3O43854 480 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 UFL1O94874 794 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 HOXA10P31260 410 aaPredicted RBP9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 TTI2Q6NXR4 508 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 KRT25Q7Z3Z0 450 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 TEX11Q8IYF3 940 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 KRT222Q8N1A0 295 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 GIMAP8Q8ND71 665 aaPredicted RBP9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 CPLX3Q8WVH0 158 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 UBXN4Q92575 508 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 AK8Q96MA6 479 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 CUEDC2Q9H467 287 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 TAB2Q9NYJ8 693 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 POLLQ9UGP5 575 aa9.34□□□□□ -0.91
TRIM53BP-201ENST00000532912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 A0A1W2PQC6 194 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 KLRG2A4D1S0 409 aaPredicted RBP9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 ONECUT3O60422 494 aaPredicted RBP9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 PARP1P09874 1014 aaKnown RBP9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 ARHGAP25P42331 645 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 PPP2R3AQ06190 1150 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 GABPAQ06546 454 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 GABPB1Q06547 395 aaPredicted RBP9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 ORC2Q13416 577 aaPredicted RBP9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 TRIM14Q14142 442 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 TMTC1Q8IUR5 882 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 MNS1Q8NEH6 495 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 TBC1D16Q8TBP0 767 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 CEP95Q96GE4 821 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 DUSP9Q99956 384 aaKnown RBP9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 MMTAG2Q9BU76 263 aaKnown RBP9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 VPS16Q9H269 839 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 THAP9Q9H5L6 903 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 RIOX1Q9H6W3 641 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 MAGEF1Q9HAY2 307 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 ZNF287Q9HBT7 754 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 GGA1Q9UJY5 639 aa9.34□□□□□ -0.92
TRIM53BP-201ENST00000532912 GREB1LQ9C091 1923 aaPredicted RBP9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 SMCO2A6NFE2 343 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 LGALS16A8MUM7 142 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 SERPINB2P05120 415 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 OR52Z1P0C646 297 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 SNHG28P0DPA3 235 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 PLCG2P16885 1265 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 PLCG1P19174 1290 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 EEF1GP26641 437 aaKnown RBP9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 UBA7P41226 1012 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 NAPAP54920 295 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 NONOQ15233 471 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 TXNRD1Q16881 649 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 COBLL1Q53SF7 1204 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 MFSD14BQ5SR56 506 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 MB21D1Q8N884 522 aa9.33□□□□□ -0.92
TRIM53BP-201ENST00000532912 ACRBPQ8NEB7 543 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms