RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 MOXD2PA6NHM9 499 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 DUSP11O75319 330 aaKnown RBP10.81□□□□□ -0.68
USF1-210ENST00000531842 BMP1P13497 986 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 GNASQ5JWF2 1037 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 C16orf86Q6ZW13 317 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 CERS3Q8IU89 383 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 TMEM199Q8N511 208 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 KATNBL1Q9H079 304 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 UPF3AQ9H1J1 476 aaKnown RBP10.81□□□□□ -0.68
USF1-210ENST00000531842 WNT8AQ9H1J5 351 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 BOLA2Q9H3K6 86 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 IL23AQ9NPF7 189 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 SWAP70Q9UH65 585 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 NRBP1Q9UHY1 535 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 MSRAQ9UJ68 235 aa10.81□□□□□ -0.68
USF1-210ENST00000531842 MUC6Q6W4X9 2439 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 A0A0U1RQG5 324 aaPredicted RBP10.8□□□□□ -0.68
USF1-210ENST00000531842 FAM86C2PA6NEL3 165 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 NDUFB10O96000 172 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 CD4P01730 458 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 ADD2P35612 726 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 GJA9P57773 515 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 SNAP25P60880 206 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 SKIV2LQ15477 1246 aaKnown RBP10.8□□□□□ -0.68
USF1-210ENST00000531842 CTR9Q6PD62 1173 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 MAMDC4Q6UXC1 1216 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 ARMCX2Q7L311 632 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 RASGRP2Q7LDG7 609 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 RHPN1Q8TCX5 695 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 PANK1Q8TE04 598 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 HERVK_113Q902F9 699 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 KIFC2Q96AC6 838 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 PURBQ96QR8 312 aaKnown RBP10.8□□□□□ -0.68
USF1-210ENST00000531842 SLF1Q9BQI6 1058 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 SH2D4AQ9H788 454 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 SLC28A3Q9HAS3 691 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 PDGFCQ9NRA1 345 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 ELP1O95163 1332 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 SYNGAP1Q96PV0 1343 aa10.8□□□□□ -0.68
USF1-210ENST00000531842 FGBP02675 491 aa10.79□□□□□ -0.68
USF1-210ENST00000531842 RASA1P20936 1047 aa10.79□□□□□ -0.68
USF1-210ENST00000531842 CST5P28325 142 aaPredicted RBP10.79□□□□□ -0.68
USF1-210ENST00000531842 TTLL4Q14679 1199 aa10.79□□□□□ -0.68
USF1-210ENST00000531842 PPP2R2DQ66LE6 453 aa10.79□□□□□ -0.68
USF1-210ENST00000531842 PSRC1Q6PGN9 363 aaPredicted RBP10.79□□□□□ -0.68
USF1-210ENST00000531842 EEPD1Q7L9B9 569 aa10.79□□□□□ -0.68
USF1-210ENST00000531842 TEX13BQ9BXU2 312 aa10.79□□□□□ -0.68
USF1-210ENST00000531842 PUS7LQ9H0K6 701 aaKnown RBP10.79□□□□□ -0.68
USF1-210ENST00000531842 HIPK3Q9H422 1215 aa10.79□□□□□ -0.68
USF1-210ENST00000531842 GOPCQ9HD26 462 aa10.79□□□□□ -0.68
USF1-210ENST00000531842 SLC4A4Q9Y6R1 1079 aa10.79□□□□□ -0.68
USF1-210ENST00000531842 SOWAHBA6NEL2 793 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 ZBBXA8MT70 800 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 F5H6K3 240 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 B4GALT4O60513 344 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 IGSF3O75054 1194 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 PRDM1O75626 825 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 KLRC3Q07444 240 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 TTF1Q15361 905 aaPredicted RBP10.78□□□□□ -0.68
USF1-210ENST00000531842 RAB30Q15771 203 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 NOL8Q76FK4 1167 aaKnown RBP10.78□□□□□ -0.68
USF1-210ENST00000531842 DEFB128Q7Z7B8 93 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 FTSJ3Q8IY81 847 aaKnown RBP10.78□□□□□ -0.68
USF1-210ENST00000531842 LRRC47Q8N1G4 583 aaKnown RBP10.78□□□□□ -0.68
USF1-210ENST00000531842 ANKRD35Q8N283 1001 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 IL27Q8NEV9 243 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 CCDC17Q96LX7 622 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 LRFN3Q9BTN0 628 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 NOC4LQ9BVI4 516 aaKnown RBP10.78□□□□□ -0.68
USF1-210ENST00000531842 KANSL2Q9H9L4 492 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 PAG1Q9NWQ8 432 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
USF1-210ENST00000531842 TANC1Q9C0D5 1861 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 TLR3O15455 904 aaKnown RBP10.77□□□□□ -0.69
USF1-210ENST00000531842 CA3P07451 260 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 CYP2C9P11712 490 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 SMPD1P17405 629 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 HOXD11P31277 338 aaPredicted RBP10.77□□□□□ -0.69
USF1-210ENST00000531842 TNFAIP2Q03169 654 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 ITGA7Q13683 1181 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 TMCO2Q7Z6W1 182 aaPredicted RBP10.77□□□□□ -0.69
USF1-210ENST00000531842 SIRT2Q8IXJ6 389 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 PCSK9Q8NBP7 692 aaKnown RBP10.77□□□□□ -0.69
USF1-210ENST00000531842 AGBL1Q96MI9 1066 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 CD320Q9NPF0 282 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 C11orf16Q9NQ32 467 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 ATP8A2Q9NTI2 1148 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 TRMT13Q9NUP7 481 aaKnown RBP10.77□□□□□ -0.69
USF1-210ENST00000531842 MTCH2Q9Y6C9 303 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 MROH7Q68CQ1 1323 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 ZBED9Q6R2W3 1325 aa10.77□□□□□ -0.69
USF1-210ENST00000531842 MINDY4BA8MYZ0 360 aa10.76□□□□□ -0.69
USF1-210ENST00000531842 DYNC1LI2O43237 492 aaPredicted RBP10.76□□□□□ -0.69
USF1-210ENST00000531842 SMARCA5O60264 1052 aaPredicted RBP10.76□□□□□ -0.69
USF1-210ENST00000531842 TLK2Q86UE8 772 aa10.76□□□□□ -0.69
USF1-210ENST00000531842 FBXO16Q8IX29 292 aaPredicted RBP10.76□□□□□ -0.69
USF1-210ENST00000531842 SLC43A3Q8NBI5 491 aa10.76□□□□□ -0.69
USF1-210ENST00000531842 ABHD16BQ9H3Z7 469 aa10.76□□□□□ -0.69
USF1-210ENST00000531842 ISY1Q9ULR0 285 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms