RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 EIF4A3P38919 411 aaKnown RBP6.76□□□□□ -1.33
USP47-211ENST00000531513 CTSKP43235 329 aa6.76□□□□□ -1.33
USP47-211ENST00000531513 SKOR2Q2VWA4 1001 aaPredicted RBP6.76□□□□□ -1.33
USP47-211ENST00000531513 CNKSR3Q6P9H4 555 aa6.76□□□□□ -1.33
USP47-211ENST00000531513 NLRC3Q7RTR2 1065 aa6.76□□□□□ -1.33
USP47-211ENST00000531513 FAM129CQ86XR2 697 aa6.76□□□□□ -1.33
USP47-211ENST00000531513 SYT8Q8NBV8 401 aa6.76□□□□□ -1.33
USP47-211ENST00000531513 CDADC1Q9BWV3 514 aa6.76□□□□□ -1.33
USP47-211ENST00000531513 EHMT1Q9H9B1 1298 aa6.76□□□□□ -1.33
USP47-211ENST00000531513 GFOD1Q9NXC2 390 aa6.76□□□□□ -1.33
USP47-211ENST00000531513 NUDT19A8MXV4 375 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 ZNF205O95201 554 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 PRKCAP17252 672 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 BMP8BP34820 402 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 ARL4AP40617 200 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 LAPTM5Q13571 262 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 SF3A1Q15459 793 aaKnown RBP6.75□□□□□ -1.33
USP47-211ENST00000531513 C9orf131Q5VYM1 1079 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 LDHDQ86WU2 507 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 SP8Q8IXZ3 490 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 TMEM192Q8IY95 271 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 TMEM87AQ8NBN3 555 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 MKRN2Q9H000 416 aaKnown RBP6.75□□□□□ -1.33
USP47-211ENST00000531513 TNFRSF12AQ9NP84 129 aa6.75□□□□□ -1.33
USP47-211ENST00000531513 ENDOUP21128 410 aaKnown RBP6.74□□□□□ -1.33
USP47-211ENST00000531513 CCNFP41002 786 aa6.74□□□□□ -1.33
USP47-211ENST00000531513 CLCQ05315 142 aa6.74□□□□□ -1.33
USP47-211ENST00000531513 RAB3GAP1Q15042 981 aa6.74□□□□□ -1.33
USP47-211ENST00000531513 CRTC3Q6UUV7 619 aa6.74□□□□□ -1.33
USP47-211ENST00000531513 ZDHHC14Q8IZN3 488 aa6.74□□□□□ -1.33
USP47-211ENST00000531513 NUP43Q8NFH3 380 aa6.74□□□□□ -1.33
USP47-211ENST00000531513 ANTXR1Q9H6X2 564 aa6.74□□□□□ -1.33
USP47-211ENST00000531513 PCDHA5Q9Y5H7 936 aa6.74□□□□□ -1.33
USP47-211ENST00000531513 ADAMTS20P59510 1910 aa6.74□□□□□ -1.33
USP47-211ENST00000531513 NCKAP1LP55160 1127 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 CYP4F8P98187 520 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 TMEM62Q0P6H9 643 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 SEZ6Q53EL9 994 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 RPTNQ6XPR3 784 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 GK5Q6ZS86 529 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 PRRT2Q7Z6L0 340 aaPredicted RBP6.73□□□□□ -1.33
USP47-211ENST00000531513 METTL16Q86W50 562 aaKnown RBP6.73□□□□□ -1.33
USP47-211ENST00000531513 ZNF296Q8WUU4 475 aaPredicted RBP6.73□□□□□ -1.33
USP47-211ENST00000531513 UBXN4Q92575 508 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 SLC6A18Q96N87 628 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 PUS7Q96PZ0 661 aaKnown RBP6.73□□□□□ -1.33
USP47-211ENST00000531513 AP5S1Q9NUS5 200 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 UBP1Q9NZI7 540 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 IMPACTQ9P2X3 320 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 PCDHB12Q9Y5F1 795 aa6.73□□□□□ -1.33
USP47-211ENST00000531513 A0A1W2PQ45 241 aaPredicted RBP6.72□□□□□ -1.33
USP47-211ENST00000531513 A0A1W2PQY0 241 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 MEIS3P2A8K0S8 358 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 HMGB1P09429 215 aaKnown RBP6.72□□□□□ -1.33
USP47-211ENST00000531513 NME1P15531 152 aaKnown RBP6.72□□□□□ -1.33
USP47-211ENST00000531513 PLEKHN1Q494U1 663 aaPredicted RBP6.72□□□□□ -1.33
USP47-211ENST00000531513 HS2ST1Q7LGA3 356 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 FAM177A1Q8N128 213 aaPredicted RBP6.72□□□□□ -1.33
USP47-211ENST00000531513 PWWP2AQ96N64 755 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 JMJD8Q96S16 334 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 ADAM7Q9H2U9 754 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 LUC7LQ9NQ29 371 aaKnown RBP6.72□□□□□ -1.33
USP47-211ENST00000531513 METTL5Q9NRN9 209 aaKnown RBP6.72□□□□□ -1.33
USP47-211ENST00000531513 PPP1R1BQ9UD71 204 aaPredicted RBP6.72□□□□□ -1.33
USP47-211ENST00000531513 ADAMTS1Q9UHI8 967 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 GGT7Q9UJ14 662 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 FBXL21Q9UKT6 434 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 ACSL6Q9UKU0 697 aa6.72□□□□□ -1.33
USP47-211ENST00000531513 TNFRSF10CO14798 259 aa6.71□□□□□ -1.34
USP47-211ENST00000531513 CELA3BP08861 270 aa6.71□□□□□ -1.34
USP47-211ENST00000531513 VAV1P15498 845 aa6.71□□□□□ -1.34
USP47-211ENST00000531513 NT5DC4Q86YG4 428 aa6.71□□□□□ -1.34
USP47-211ENST00000531513 REXO1Q8N1G1 1221 aaKnown RBP6.71□□□□□ -1.34
USP47-211ENST00000531513 LINC01356Q8N9X3 169 aa6.71□□□□□ -1.34
USP47-211ENST00000531513 TP53I13Q8NBR0 393 aaPredicted RBP6.71□□□□□ -1.34
USP47-211ENST00000531513 RNF34Q969K3 372 aa6.71□□□□□ -1.34
USP47-211ENST00000531513 BUB1BO60566 1050 aaPredicted RBP6.7□□□□□ -1.34
USP47-211ENST00000531513 MCM4P33991 863 aa6.7□□□□□ -1.34
USP47-211ENST00000531513 NFKB2Q00653 900 aa6.7□□□□□ -1.34
USP47-211ENST00000531513 APOBRQ0VD83 1088 aa6.7□□□□□ -1.34
USP47-211ENST00000531513 AUHQ13825 339 aaKnown RBP6.7□□□□□ -1.34
USP47-211ENST00000531513 CBX2Q14781 532 aaPredicted RBP6.7□□□□□ -1.34
USP47-211ENST00000531513 RTP2Q5QGT7 225 aa6.7□□□□□ -1.34
USP47-211ENST00000531513 DBX2Q6ZNG2 339 aa6.7□□□□□ -1.34
USP47-211ENST00000531513 TMEM52Q8NDY8 209 aa6.7□□□□□ -1.34
USP47-211ENST00000531513 TEPSINQ96N21 525 aa6.7□□□□□ -1.34
USP47-211ENST00000531513 FANCCQ00597 558 aa6.69□□□□□ -1.34
USP47-211ENST00000531513 ERICH6BQ5W0A0 696 aa6.69□□□□□ -1.34
USP47-211ENST00000531513 SLC9A7Q96T83 725 aa6.69□□□□□ -1.34
USP47-211ENST00000531513 DSCC1Q9BVC3 393 aa6.69□□□□□ -1.34
USP47-211ENST00000531513 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
USP47-211ENST00000531513 TGIF2Q9GZN2 237 aa6.69□□□□□ -1.34
USP47-211ENST00000531513 PRR13Q9NZ81 148 aa6.69□□□□□ -1.34
USP47-211ENST00000531513 ZC3H12DA2A288 527 aaKnown RBP6.68□□□□□ -1.34
USP47-211ENST00000531513 FAM86C2PA6NEL3 165 aa6.68□□□□□ -1.34
USP47-211ENST00000531513 FFAR3O14843 346 aa6.68□□□□□ -1.34
USP47-211ENST00000531513 SHOXO15266 292 aa6.68□□□□□ -1.34
USP47-211ENST00000531513 GSNP06396 782 aa6.68□□□□□ -1.34
USP47-211ENST00000531513 MSL3P1P0C860 447 aa6.68□□□□□ -1.34
USP47-211ENST00000531513 HSP90B1P14625 803 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms