RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
CTSB-221ENST00000531502 MFSD5Q6N075 450 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 ARMCX2Q7L311 632 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 ZNF444Q8N0Y2 327 aaPredicted RBP17.18■□□□□ 0.34
CTSB-221ENST00000531502 GMCL1P1Q8NEA9 526 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 GLT1D1Q96MS3 346 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.18■□□□□ 0.341e-7■■■■■ 39.9
CTSB-221ENST00000531502 DCTPP1Q9H773 170 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 FBXO40Q9UH90 709 aa17.18■□□□□ 0.34
CTSB-221ENST00000531502 PATL2C9JE40 543 aaKnown RBP17.17■□□□□ 0.34
CTSB-221ENST00000531502 TTLL1O95922 423 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 ZFYP08048 801 aaPredicted RBP17.17■□□□□ 0.34
CTSB-221ENST00000531502 C6orf222P0C671 652 aaPredicted RBP17.17■□□□□ 0.34
CTSB-221ENST00000531502 GNAT2P19087 354 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 DNAJB2P25686 324 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 TDO2P48775 406 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 TMEM240Q5SV17 173 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 RASIP1Q5U651 963 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 IFNL3Q8IZI9 196 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 LRRC47Q8N1G4 583 aaKnown RBP17.17■□□□□ 0.34
CTSB-221ENST00000531502 ANKRD35Q8N283 1001 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
CTSB-221ENST00000531502 NEDD1Q8NHV4 660 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 MROH7Q68CQ1 1323 aa17.17■□□□□ 0.34
CTSB-221ENST00000531502 ARVCFO00192 962 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 BMP3P12645 472 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 CNTN2Q02246 1040 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 SLFN13Q68D06 897 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 FAM126BQ8IXS8 530 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 CCDC144CPQ8IYA2 1237 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 FAM133AQ8N9E0 248 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
CTSB-221ENST00000531502 ZNF287Q9HBT7 754 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 CTDP1Q9Y5B0 961 aaPredicted RBP17.16■□□□□ 0.34
CTSB-221ENST00000531502 TTC28Q96AY4 2481 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 ZNF536O15090 1300 aa17.16■□□□□ 0.34
CTSB-221ENST00000531502 A0A0U1RQG5 324 aaPredicted RBP17.15■□□□□ 0.34
CTSB-221ENST00000531502 FDX1P10109 184 aa17.15■□□□□ 0.34
CTSB-221ENST00000531502 USP38Q8NB14 1042 aa17.15■□□□□ 0.34
CTSB-221ENST00000531502 ZNF576Q9H609 170 aa17.15■□□□□ 0.34
CTSB-221ENST00000531502 ASTN1O14525 1302 aa17.15■□□□□ 0.34
CTSB-221ENST00000531502 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.14■□□□□ 0.33
CTSB-221ENST00000531502 SOWAHBA6NEL2 793 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 TMEM232C9JQI7 657 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 CD4P01730 458 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 APPP05067 770 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 CSF2RAP15509 400 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 PPIGQ13427 754 aaKnown RBP eCLIP17.14■□□□□ 0.332e-12■□□□□ 8.5
CTSB-221ENST00000531502 GNASQ5JWF2 1037 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 SLC43A3Q8NBI5 491 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 TIFAQ96CG3 184 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 GPATCH3Q96I76 525 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 ACAD9Q9H845 621 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 SPC25Q9HBM1 224 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 A1CFQ9NQ94 594 aaKnown RBP17.14■□□□□ 0.33
CTSB-221ENST00000531502 HOMER2Q9NSB8 354 aa17.14■□□□□ 0.33
CTSB-221ENST00000531502 GNEQ9Y223 722 aaKnown RBP17.14■□□□□ 0.33
CTSB-221ENST00000531502 LRRC37A2A6NM11 1700 aa17.13■□□□□ 0.33
CTSB-221ENST00000531502 TSPY3P0CV98 308 aa17.13■□□□□ 0.33
CTSB-221ENST00000531502 TSPY8P0CW00 308 aa17.13■□□□□ 0.33
CTSB-221ENST00000531502 BEX3Q00994 111 aa17.13■□□□□ 0.33
CTSB-221ENST00000531502 TFAP4Q01664 338 aa17.13■□□□□ 0.33
CTSB-221ENST00000531502 PI4K2BQ8TCG2 481 aa17.13■□□□□ 0.33
CTSB-221ENST00000531502 GMCL1Q96IK5 515 aa17.13■□□□□ 0.33
CTSB-221ENST00000531502 AGBL1Q96MI9 1066 aa17.13■□□□□ 0.33
CTSB-221ENST00000531502 PBX4Q9BYU1 374 aa17.13■□□□□ 0.33
CTSB-221ENST00000531502 CHD9Q3L8U1 2897 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 GRXCR1A8MXD5 290 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 FOXP2O15409 715 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 PLA2G6O60733 806 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 ACRP10323 421 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 PBX2P40425 430 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 STAT2P52630 851 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 PDE4BQ07343 736 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 PPARAQ07869 468 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 ZNF365Q70YC5 407 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 FAM160B2Q86V87 743 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 STAG1Q8WVM7 1258 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 VTI1AQ96AJ9 217 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
CTSB-221ENST00000531502 LCTP09848 1927 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 PTGS1P23219 599 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 ZMYM1Q5SVZ6 1142 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 TMEM199Q8N511 208 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 CHURC1Q8WUH1 139 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 NACAP1Q9BZK3 213 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 PPP1R12CQ9BZL4 782 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 IL17RBQ9NRM6 502 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.11■□□□□ 0.336e-6■■□□□ 13.9
CTSB-221ENST00000531502 DDX49Q9Y6V7 483 aaKnown RBP17.11■□□□□ 0.33
CTSB-221ENST00000531502 GRIN2DO15399 1336 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 TTC41PQ6P2S7 1318 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 MYO9BQ13459 2157 aa17.11■□□□□ 0.33
CTSB-221ENST00000531502 ASB14A6NK59 587 aa17.1■□□□□ 0.33
CTSB-221ENST00000531502 TLR3O15455 904 aaKnown RBP17.1■□□□□ 0.33
CTSB-221ENST00000531502 MCCP23508 829 aa17.1■□□□□ 0.33
CTSB-221ENST00000531502 CYP2C18P33260 490 aa17.1■□□□□ 0.33
CTSB-221ENST00000531502 SLC1A4P43007 532 aa17.1■□□□□ 0.33
CTSB-221ENST00000531502 LRRFIP1Q32MZ4 808 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms