RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TNNI2P48788 182 aa8.63□□□□□ -1.03
TRIM53CP-201ENST00000531490 PRMT2P55345 433 aa8.63□□□□□ -1.03
TRIM53CP-201ENST00000531490 SRSF11Q05519 484 aaKnown RBP8.63□□□□□ -1.03
TRIM53CP-201ENST00000531490 CRTC2Q53ET0 693 aaPredicted RBP8.63□□□□□ -1.03
TRIM53CP-201ENST00000531490 APOBEC3HQ6NTF7 200 aaKnown RBP8.63□□□□□ -1.03
TRIM53CP-201ENST00000531490 C1orf216Q8TAB5 229 aa8.63□□□□□ -1.03
TRIM53CP-201ENST00000531490 DIS3LQ8TF46 1054 aaKnown RBP8.63□□□□□ -1.03
TRIM53CP-201ENST00000531490 DEFB118Q96PH6 123 aa8.63□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZMYND8Q9ULU4 1186 aaPredicted RBP8.63□□□□□ -1.03
TRIM53CP-201ENST00000531490 FAM181BA6NEQ2 426 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 CIAO1O76071 339 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 SGPL1O95470 568 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 HOXD10P28358 340 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 IL15P40933 162 aaPredicted RBP8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 TFCP2Q12800 502 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 PTK7Q13308 1070 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 PUM3Q15397 648 aaKnown RBP8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 EFHC2Q5JST6 749 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 GPAT2Q6NUI2 795 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 ANKRD23Q86SG2 305 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 TSEN2Q8NCE0 465 aaKnown RBP8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 WHAMMQ8TF30 809 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 VRTNQ9H8Y1 702 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZCCHC17Q9NP64 241 aaKnown RBP8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 SPTBN5Q9NRC6 3674 aaKnown RBP8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 OTOFQ9HC10 1997 aa8.62□□□□□ -1.03
TRIM53CP-201ENST00000531490 ADCY3O60266 1144 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 TFRCP02786 760 aaKnown RBP8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 BCRP11274 1271 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 ADORA1P30542 326 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 NOS2P35228 1153 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 FLT3LGP49771 235 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 UBXN2AP68543 259 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 PPATQ06203 517 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 TCP10Q12799 353 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 TEAD4Q15561 434 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 ATP2B3Q16720 1220 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 CAVIN4Q5BKX8 364 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZNF385CQ66K41 422 aaPredicted RBP8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 VPS37DQ86XT2 251 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZFPM1Q8IX07 1006 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 DEFB123Q8N688 67 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 SSH3Q8TE77 659 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 LPIN2Q92539 896 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 PAWRQ96IZ0 340 aaKnown RBP8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 TSPAN10Q9H1Z9 355 aaPredicted RBP8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZDHHC3Q9NYG2 299 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 RBM19Q9Y4C8 960 aaKnown RBP8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 TTC28Q96AY4 2481 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 IFIT1P09914 478 aaKnown RBP8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 SYN1P17600 705 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 TXLNAP40222 546 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 PHKA1P46020 1223 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 FCGRTP55899 365 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 NFIAQ12857 509 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 MVPQ14764 893 aaKnown RBP8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 CEP85Q6P2H3 762 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 SIRT2Q8IXJ6 389 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 C7orf61Q8IZ16 206 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 TEKT1Q969V4 418 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZDHHC15Q96MV8 337 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZNF341Q9BYN7 854 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZBTB40Q9NUA8 1239 aa8.61□□□□□ -1.03
TRIM53CP-201ENST00000531490 A0A1B0GUL7 405 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 A0A1W2PNR3 127 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 A0A1W2PPC1 479 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 FAM196BA6NMK8 535 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L15C9J2P7 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L10C9JJH3 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L13C9JLJ4 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L11C9JVI0 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L21D6R901 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L18D6R9N7 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L22D6RA61 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L17D6RBQ6 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L19D6RCP7 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L20D6RJB6 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 FRAT2O75474 233 aaPredicted RBP8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 SURF6O75683 361 aaKnown RBP8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 SLC5A1P13866 664 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 SEC13P55735 322 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 USP17L24Q0WX57 530 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 G3BP1Q13283 466 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 ARSJQ5FYB0 599 aaPredicted RBP8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 SH3PXD2AQ5TCZ1 1133 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 DCAF15Q66K64 600 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 FAM83AQ86UY5 434 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 NEUROD6Q96NK8 337 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 PARK7Q99497 189 aaKnown RBP8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 GDF15Q99988 308 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 NDFIP2Q9NV92 336 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 TMOD2Q9NZR1 351 aa8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.6□□□□□ -1.03
TRIM53CP-201ENST00000531490 BNIP3LO60238 219 aa8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 MX2P20592 715 aa8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 MAGEA10P43363 369 aaPredicted RBP8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 HDLBPQ00341 1268 aaKnown RBP8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 DPYDQ12882 1025 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms