RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ABHD16BQ9H3Z7 469 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 IL23AQ9NPF7 189 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 COL11A1P12107 1806 aaPredicted RBP11.06□□□□□ -0.64
NEDD8-206ENST00000531430 ZNF236Q9UL36 1845 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 SYNGAP1Q96PV0 1343 aa11.06□□□□□ -0.64
NEDD8-206ENST00000531430 MYH8P13535 1937 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
NEDD8-206ENST00000531430 NDUFB10O96000 172 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 GJA9P57773 515 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 TNFAIP2Q03169 654 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 MAMDC4Q6UXC1 1216 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 ARMCX2Q7L311 632 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 CCDC144CPQ8IYA2 1237 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEDD8-206ENST00000531430 PUS7LQ9H0K6 701 aaKnown RBP11.05□□□□□ -0.64
NEDD8-206ENST00000531430 AP5M1Q9H0R1 490 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 CXXC1Q9P0U4 656 aaPredicted RBP11.05□□□□□ -0.64
NEDD8-206ENST00000531430 PLXNA1Q9UIW2 1896 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 CDH23Q9H251 3354 aa11.05□□□□□ -0.64
NEDD8-206ENST00000531430 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.04□□□□□ -0.64
NEDD8-206ENST00000531430 ADCY6O43306 1168 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 RAB11FIP3O75154 756 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 PRDM1O75626 825 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 MYOGP15173 224 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 ATP5JP18859 108 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 CNTN2Q02246 1040 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 ITGA7Q13683 1181 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 UBE3CQ15386 1083 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 EEPD1Q7L9B9 569 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 FAM126BQ8IXS8 530 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 RPAP2Q8IXW5 612 aaPredicted RBP11.04□□□□□ -0.64
NEDD8-206ENST00000531430 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
NEDD8-206ENST00000531430 NECAB3Q96P71 396 aaPredicted RBP11.04□□□□□ -0.64
NEDD8-206ENST00000531430 HAUS7Q99871 368 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 TRPV6Q9H1D0 765 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 HIPK3Q9H422 1215 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 NYAP2Q9P242 653 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 FEM1BQ9UK73 627 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 MTMR7Q9Y216 660 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 SLC4A7Q9Y6M7 1214 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 UMODL1Q5DID0 1318 aa11.04□□□□□ -0.64
NEDD8-206ENST00000531430 DNAJC25-GNG10A0A024R161 153 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 RFXAPO00287 272 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 SMARCA5O60264 1052 aaPredicted RBP11.03□□□□□ -0.64
NEDD8-206ENST00000531430 ZEB2O60315 1214 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 RASA1P20936 1047 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 PTGS1P23219 599 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 TDO2P48775 406 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 SNAP25P60880 206 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 PSMC6P62333 389 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 SLFN13Q68D06 897 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
NEDD8-206ENST00000531430 RPUSD2Q8IZ73 545 aaKnown RBP11.03□□□□□ -0.64
NEDD8-206ENST00000531430 CHST13Q8NET6 341 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 HERVK_113Q902F9 699 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 FAM122AQ96E09 287 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 CERS4Q9HA82 394 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
NEDD8-206ENST00000531430 FBXO40Q9UH90 709 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 YBX2Q9Y2T7 364 aaKnown RBP11.03□□□□□ -0.64
NEDD8-206ENST00000531430 COG6Q9Y2V7 657 aa11.03□□□□□ -0.64
NEDD8-206ENST00000531430 SPTBN5Q9NRC6 3674 aaKnown RBP11.03□□□□□ -0.64
NEDD8-206ENST00000531430 A0A0G2JMZ2 1700 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 TMEM232C9JQI7 657 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 MS4A1P11836 297 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 BMP3P12645 472 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 ALAS1P13196 640 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 CST5P28325 142 aaPredicted RBP11.02□□□□□ -0.65
NEDD8-206ENST00000531430 RASIP1Q5U651 963 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 DEFB128Q7Z7B8 93 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 SCLYQ96I15 445 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 STRBPQ96SI9 672 aaKnown RBP11.02□□□□□ -0.65
NEDD8-206ENST00000531430 UPF3AQ9H1J1 476 aaKnown RBP11.02□□□□□ -0.65
NEDD8-206ENST00000531430 SLC38A10Q9HBR0 1119 aa11.02□□□□□ -0.65
NEDD8-206ENST00000531430 DDX49Q9Y6V7 483 aaKnown RBP11.02□□□□□ -0.65
NEDD8-206ENST00000531430 TCF20Q9UGU0 1960 aaKnown RBP11.02□□□□□ -0.65
NEDD8-206ENST00000531430 ASB14A6NK59 587 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 GSG1L2A8MUP6 293 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 CABYRO75952 493 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 CD4P01730 458 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 TSPY3P0CV98 308 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 TSPY8P0CW00 308 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 CHMP4BP1P59074 171 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 TFF2Q03403 129 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 FSCN1Q16658 493 aaKnown RBP11.01□□□□□ -0.65
NEDD8-206ENST00000531430 KIAA1211Q6ZU35 1233 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 TLK2Q86UE8 772 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 SIRT2Q8IXJ6 389 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 CEP95Q96GE4 821 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 TRERF1Q96PN7 1200 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 ACAD9Q9H845 621 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 ZNF287Q9HBT7 754 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 PDGFCQ9NRA1 345 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 RNF146Q9NTX7 359 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 ZBED9Q6R2W3 1325 aa11.01□□□□□ -0.65
NEDD8-206ENST00000531430 MCM3APO60318 1980 aa11□□□□□ -0.65
NEDD8-206ENST00000531430 SOWAHBA6NEL2 793 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms