RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 COL6A1P12109 1028 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 ALAS1P13196 640 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 TRDNQ13061 729 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 HABP4Q5JVS0 413 aaKnown RBP12.88□□□□□ -0.35
CAPN1-221ENST00000531068 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-221ENST00000531068 UBAC1Q9BSL1 405 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 SENP6Q9GZR1 1112 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-221ENST00000531068 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 GPCPD1Q9NPB8 672 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 HOMER2Q9NSB8 354 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 RNF146Q9NTX7 359 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 FAM184BQ9ULE4 1060 aa12.88□□□□□ -0.35
CAPN1-221ENST00000531068 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-221ENST00000531068 MKI67P46013 3256 aaKnown RBP12.87□□□□□ -0.35
CAPN1-221ENST00000531068 RBBP6Q7Z6E9 1792 aaKnown RBP12.87□□□□□ -0.35
CAPN1-221ENST00000531068 ICAM1P05362 532 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 SNHG28P0DPA3 235 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 PDHBP11177 359 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 AKR1A1P14550 325 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 ZNF543Q08ER8 600 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 TTBK2Q6IQ55 1244 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 ZKSCAN3Q9BRR0 538 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 CCPG1Q9ULG6 757 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 PFASO15067 1338 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 ZNF536O15090 1300 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 NEDD4P46934 1319 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 FRMPD2Q68DX3 1309 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-221ENST00000531068 PDE4DIPQ5VU43 2346 aa12.87□□□□□ -0.35
CAPN1-221ENST00000531068 MYH7P12883 1935 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 BRCA2P51587 3418 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 ASB14A6NK59 587 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 B4E1Z4 1266 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 SGSM2O43147 1006 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-221ENST00000531068 ZNF865P0CJ78 1059 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-221ENST00000531068 SLC16A2P36021 539 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 SNAP25P60880 206 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-221ENST00000531068 RNF180Q86T96 592 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 C7orf61Q8IZ16 206 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 PNMA1Q8ND90 353 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 RANBP17Q9H2T7 1088 aaKnown RBP12.86□□□□□ -0.35
CAPN1-221ENST00000531068 ABHD16BQ9H3Z7 469 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 A1CFQ9NQ94 594 aaKnown RBP12.86□□□□□ -0.35
CAPN1-221ENST00000531068 XPNPEP3Q9NQH7 507 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 MGAMO43451 1857 aa12.86□□□□□ -0.35
CAPN1-221ENST00000531068 CDC45O75419 566 aa12.85□□□□□ -0.35
CAPN1-221ENST00000531068 SNAI1O95863 264 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-221ENST00000531068 TAL1P17542 331 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-221ENST00000531068 ACVR2BQ13705 512 aa12.85□□□□□ -0.35
CAPN1-221ENST00000531068 LRRC41Q15345 812 aa12.85□□□□□ -0.35
CAPN1-221ENST00000531068 ANO1Q5XXA6 986 aa12.85□□□□□ -0.35
CAPN1-221ENST00000531068 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
CAPN1-221ENST00000531068 ENAHQ8N8S7 591 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-221ENST00000531068 FAM133AQ8N9E0 248 aa12.85□□□□□ -0.35
CAPN1-221ENST00000531068 ZHX1Q9UKY1 873 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-221ENST00000531068 CNTN2Q02246 1040 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 PTH1RQ03431 593 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 LRRC26Q2I0M4 334 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 ASPRV1Q53RT3 343 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 IFIT1BQ5T764 474 aaKnown RBP12.84□□□□□ -0.35
CAPN1-221ENST00000531068 NSMFQ6X4W1 530 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
CAPN1-221ENST00000531068 MAP4K1Q92918 833 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 MAF1Q9H063 256 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 IL25Q9H293 177 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 SPC25Q9HBM1 224 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-221ENST00000531068 CYP39A1Q9NYL5 469 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 TNKSO95271 1327 aa12.84□□□□□ -0.35
CAPN1-221ENST00000531068 DOCK3Q8IZD9 2030 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 LOC102724159A0A0B4J2E5 919 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 A0A1W2PPC1 479 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 ERICH2A1L162 156 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 DUSP11O75319 330 aaKnown RBP12.83□□□□□ -0.36
CAPN1-221ENST00000531068 CYP21A2P08686 494 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 PARP1P09874 1014 aaKnown RBP12.83□□□□□ -0.36
CAPN1-221ENST00000531068 ADCYAP1R1P41586 468 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 SART3Q15020 963 aaKnown RBP12.83□□□□□ -0.36
CAPN1-221ENST00000531068 PWP2Q15269 919 aaKnown RBP12.83□□□□□ -0.36
CAPN1-221ENST00000531068 MUM1L1Q5H9M0 696 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 SLC39A5Q6ZMH5 540 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 ARMCX2Q7L311 632 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 NCOA7Q8NI08 942 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 TSEN34Q9BSV6 310 aaKnown RBP12.83□□□□□ -0.36
CAPN1-221ENST00000531068 UBA5Q9GZZ9 404 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 ADD3Q9UEY8 706 aaKnown RBP12.83□□□□□ -0.36
CAPN1-221ENST00000531068 WDR19Q8NEZ3 1342 aa12.83□□□□□ -0.36
CAPN1-221ENST00000531068 GREB1LQ9C091 1923 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-221ENST00000531068 B4DLN1 442 aa12.82□□□□□ -0.36
CAPN1-221ENST00000531068 IFIT3O14879 490 aaKnown RBP12.82□□□□□ -0.36
CAPN1-221ENST00000531068 SLC34A2O95436 690 aa12.82□□□□□ -0.36
CAPN1-221ENST00000531068 PGK1P00558 417 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms