RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 GLI1P08151 1106 aa10.94□□□□□ -0.66
CSDE1-213ENST00000530784 TXKP42681 527 aa10.94□□□□□ -0.66
CSDE1-213ENST00000530784 NOL9Q5SY16 702 aaKnown RBP10.94□□□□□ -0.66
CSDE1-213ENST00000530784 OXR1Q8N573 874 aa10.94□□□□□ -0.66
CSDE1-213ENST00000530784 LIN37Q96GY3 246 aaPredicted RBP10.94□□□□□ -0.66
CSDE1-213ENST00000530784 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.94□□□□□ -0.66
CSDE1-213ENST00000530784 ZMYM5Q9UJ78 669 aa10.94□□□□□ -0.66
CSDE1-213ENST00000530784 KDM6BO15054 1643 aa10.94□□□□□ -0.66
CSDE1-213ENST00000530784 ABCC2Q92887 1545 aa10.94□□□□□ -0.66
CSDE1-213ENST00000530784 CBFA2T2O43439 604 aa10.93□□□□□ -0.66
CSDE1-213ENST00000530784 SSBP05455 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
CSDE1-213ENST00000530784 SLC7A5Q01650 507 aa10.93□□□□□ -0.66
CSDE1-213ENST00000530784 DUSP4Q13115 394 aa10.93□□□□□ -0.66
CSDE1-213ENST00000530784 OGFOD2Q6N063 350 aa10.93□□□□□ -0.66
CSDE1-213ENST00000530784 KLHL6Q8WZ60 621 aa10.93□□□□□ -0.66
CSDE1-213ENST00000530784 BMP8BP34820 402 aa10.92□□□□□ -0.66
CSDE1-213ENST00000530784 TIGD5Q53EQ6 642 aa10.92□□□□□ -0.66
CSDE1-213ENST00000530784 HAUS7Q99871 368 aa10.92□□□□□ -0.66
CSDE1-213ENST00000530784 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.92□□□□□ -0.66
CSDE1-213ENST00000530784 FITM1A5D6W6 292 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 H0Y8X5 98 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 GSNP06396 782 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 VAV1P15498 845 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 ARID5AQ03989 594 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 TCEAL1Q15170 157 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 SPPL2CQ8IUH8 684 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 ANKS4BQ8N8V4 417 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 FHOD1Q9Y613 1164 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 UHRF1BP1LA0JNW5 1464 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 RAPGEF2Q9Y4G8 1499 aa10.91□□□□□ -0.66
CSDE1-213ENST00000530784 DISP1Q96F81 1524 aa10.9□□□□□ -0.66
CSDE1-213ENST00000530784 PLB1Q6P1J6 1458 aa10.9□□□□□ -0.66
CSDE1-213ENST00000530784 SMAD7O15105 426 aaKnown RBP10.9□□□□□ -0.66
CSDE1-213ENST00000530784 ZNF205O95201 554 aa10.9□□□□□ -0.66
CSDE1-213ENST00000530784 ITGA4P13612 1032 aa10.9□□□□□ -0.66
CSDE1-213ENST00000530784 CHRNEQ04844 493 aa10.9□□□□□ -0.66
CSDE1-213ENST00000530784 NR0B2Q15466 257 aa10.9□□□□□ -0.66
CSDE1-213ENST00000530784 FIBCD1Q8N539 461 aa10.9□□□□□ -0.66
CSDE1-213ENST00000530784 MAP6Q96JE9 813 aa10.9□□□□□ -0.66
CSDE1-213ENST00000530784 ASXL2Q76L83 1435 aa10.9□□□□□ -0.66
CSDE1-213ENST00000530784 USP2O75604 605 aaPredicted RBP10.89□□□□□ -0.67
CSDE1-213ENST00000530784 EPHX1P07099 455 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 FGRP09769 529 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 ETFBP38117 255 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 HEATR6Q6AI08 1181 aaKnown RBP10.89□□□□□ -0.67
CSDE1-213ENST00000530784 KIAA1211LQ6NV74 962 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 VHLLQ6RSH7 139 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 LILRA2Q8N149 483 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 RNF32Q9H0A6 362 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 KLHL25Q9H0H3 589 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 NOL6Q9H6R4 1146 aaKnown RBP10.89□□□□□ -0.67
CSDE1-213ENST00000530784 UACAQ9BZF9 1416 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 UGGT2Q9NYU1 1516 aa10.89□□□□□ -0.67
CSDE1-213ENST00000530784 LRRC10BA6NIK2 292 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 NOTOA8MTQ0 251 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 DNAJA1P31689 397 aaKnown RBP10.88□□□□□ -0.67
CSDE1-213ENST00000530784 MLANAQ16655 118 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 CWF19L1Q69YN2 538 aaKnown RBP10.88□□□□□ -0.67
CSDE1-213ENST00000530784 MPZL3Q6UWV2 235 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 ADCY4Q8NFM4 1077 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 HHIPL1Q96JK4 782 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 FGD4Q96M96 766 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 CDADC1Q9BWV3 514 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 AP5S1Q9NUS5 200 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 FAM53CQ9NYF3 392 aa10.88□□□□□ -0.67
CSDE1-213ENST00000530784 TSPOAP1O95153 1857 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 GLI2P10070 1586 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 PSPNO60542 156 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 RTP2Q5QGT7 225 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 PRR23BQ6ZRT6 265 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 MCF2L2Q86YR7 1114 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 POU5F2Q8N7G0 328 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 SLC43A3Q8NBI5 491 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 SLC12A9Q9BXP2 914 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 KRTAP9-2Q9BYQ4 174 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 WHRNQ9P202 907 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 KIAA0556O60303 1618 aa10.87□□□□□ -0.67
CSDE1-213ENST00000530784 A0A087WZG4 1122 aa10.86□□□□□ -0.67
CSDE1-213ENST00000530784 KIR2DL1P43626 348 aaPredicted RBP10.86□□□□□ -0.67
CSDE1-213ENST00000530784 KIR2DL2P43627 348 aaPredicted RBP10.86□□□□□ -0.67
CSDE1-213ENST00000530784 PPP2R5DQ14738 602 aa10.86□□□□□ -0.67
CSDE1-213ENST00000530784 ADAT2Q7Z6V5 191 aaKnown RBP10.86□□□□□ -0.67
CSDE1-213ENST00000530784 FCRL2Q96LA5 508 aaPredicted RBP10.86□□□□□ -0.67
CSDE1-213ENST00000530784 ZDHHC15Q96MV8 337 aa10.86□□□□□ -0.67
CSDE1-213ENST00000530784 ERVK13-1Q9NX77 482 aa10.86□□□□□ -0.67
CSDE1-213ENST00000530784 SUSD2Q9UGT4 822 aa10.86□□□□□ -0.67
CSDE1-213ENST00000530784 GPR160Q9UJ42 338 aa10.86□□□□□ -0.67
CSDE1-213ENST00000530784 KDM5BQ9UGL1 1544 aa10.85□□□□□ -0.67
CSDE1-213ENST00000530784 EFEMP2O95967 443 aa10.85□□□□□ -0.67
CSDE1-213ENST00000530784 GSTM1P09488 218 aa10.85□□□□□ -0.67
CSDE1-213ENST00000530784 CEP128Q6ZU80 1094 aa10.85□□□□□ -0.67
CSDE1-213ENST00000530784 GBP3Q9H0R5 595 aa10.85□□□□□ -0.67
CSDE1-213ENST00000530784 ZNF408Q9H9D4 720 aa10.85□□□□□ -0.67
CSDE1-213ENST00000530784 PRKAG3Q9UGI9 489 aa10.85□□□□□ -0.67
CSDE1-213ENST00000530784 DIS3Q9Y2L1 958 aaKnown RBP10.85□□□□□ -0.67
CSDE1-213ENST00000530784 SF3B6Q9Y3B4 125 aaKnown RBP10.85□□□□□ -0.67
CSDE1-213ENST00000530784 ENDOUP21128 410 aaKnown RBP10.84□□□□□ -0.67
CSDE1-213ENST00000530784 GALK1P51570 392 aa10.84□□□□□ -0.67
CSDE1-213ENST00000530784 SLC14A2Q15849 920 aa10.84□□□□□ -0.67
CSDE1-213ENST00000530784 TNNI3KQ59H18 835 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 277.6 ms